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Information for unigene UN22876
| FASTA Sequence |
| Unigene ID: UN22876 | Length: 1116 |
| SNP | ACTTGTTCCACTTCAGGACAAAGGTTAAGCACCAAAAAAAAAAAAAACACTTCCCCGGCGAATATTCTCTCGTTTTCCGGCACCGA
ACATCGGCGTAGATCGCCAGTTTAACAGACAGTGGATTAAAATGGCGGTGGACAGTGTGTATCTGATGCAGTTTGTGGAAGAAACA
TCGTTTTACAATCGCATTGTTCTGAGTCACCTCTTGCCGTCGAATCTATGGGATTTTTTACCGCATTTTCTCCAGACGTGGCTCCG
GAACTACCTCGCCGGAACCTTGCTCTACTTCATCTCAGGCTTTCTCTGGTGCTTCTACATCTATTACCTCAAACTTAACGTTTATC
TCCCCAGAGATGCCATTCCTACAAGAAAGGCTATGCTTTTGCAAATATCTGTGGCAATGAAGGCGATGCCTTGGTACACTCTGCTT
CCAACTGTCTCCGAGTATATGATCGAAAGTGGCTGGACCAAATGTTACTCTAAGATAGGCGAAGTCAGCTGGATACTCTACTTTGT
TTCCATCGCTGTCTATCTTGTTTTAGTCGAGTTTGGTATTTATTGGATGCACAGAGAGCTCCATGACATTAAGCCTCTTTACAAAT
ATCTCCATGCCACCCATCATATCTACAACAAGCAGAACACACTCTCTCCCTTTGCCGGGCTTGCGTTCCACCCACTAGACGGGATA
CTTCAAGCAGTTCCGCATGTGGTAGCTCTGTTCATAGTGCCAATTCATTTCACAACCCATCTAGGTCTCTTGTTCATGGAAGCGAT
ATGGACAGCGAACATCCACGACTGCATCCACGGTAACATATGGCCTGTGATGGGTGCAGGGTACCATACGATACACCACACCACTT
ACAAGCATAACTATGGACATTACACCATATGGATGGATTGGATGTTTGGCTCTCTTAGAGACCCTCTCTTACAAGAAGAAGATTAT
AAAACAGAGTGAGAATGCCCCTTTTGTGTTTTCCTTTTCTTGTTCAAAGTTGCAACCTTTTTATGTTTTTCTGTCAAACCGTTCCA
GTTATTTTTTGTTCAGAGATGTTGACTGCAATTTTGCTGTCCTTTTTTATTATTTTTTTTATGGCATCTGCAATTTTGCTGTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_186907 delta(7)-sterol-C5(6)-desaturase 1 [Arabidopsis thaliana] | 1390 | 2e-151 |
| AAM66060 sterol-C5-desaturase [Arabidopsis thaliana] | 1385 | 7e-151 |
| AAD38120 delta7 sterol C-5 desaturase [Arabidopsis thaliana] | 1383 | 1e-150 |
| XP_002882239 hypothetical protein ARALYDRAFT_477495 [Arabidopsis lyrata subsp. lyrata] | 1380 | 3e-150 |
| CAA62079 sterol-C5-desaturase [Arabidopsis thaliana] | 1373 | 2e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39208 Delta(7)-sterol-C5(6)-desaturase 1 | 1390 | 8e-153 |
| Q9M883 Putative Delta(7)-sterol-C5(6)-desaturase 2 | 1243 | 9e-136 |
| Q9ZT29 Delta(7)-sterol-C5(6)-desaturase | 1207 | 1e-131 |
| O88822 Lathosterol oxidase | 312 | 8e-028 |
| O75845 Lathosterol oxidase | 310 | 1e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q67XU7 At3g02580 | 1390 | 1e-151 |
| Q1KUR4 Putative uncharacterized protein | 1322 | 1e-143 |
| B9H316 Predicted protein | 1243 | 1e-134 |
| B9N251 Predicted protein | 1222 | 4e-132 |
| B9RSN7 Sterol desaturase, putative | 1222 | 4e-132 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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