Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22877

FASTA Sequence
Unigene ID: UN22877Length: 1141 SSR 
GAGGTATAAAAACTTTTTTAACTGAAAAAAAATGATAAGCTAAGTAATAAGTAGACAATATGTCCGAAAGGAAAAAGAAAGACTAA
TAAAATCGTAGCAAACTATATAAACCATAGAAAGCATCAGCATGAGAATTTGTATTACTAGTTACGTTGAGTAAAGCTTAAACTAC
CTTCTCTGGTTCCTTGACAGCTTCTTCGCTTTCTTTGTCATCTGCTTCCTGCCTCTTGTCCGTCTCCTACGAGATTGCAGGTTCTG
AGCTTTGAGCGTTCTCATCCGATTCAGTAGGTTGCTTTAAGGCACCATCATCAATCGAATCTTTCAACTTCTCCGTTATTTCAGTC
TCACTCGCACCTTCTGATGACTTCTCAGTGGTTTCATCGCCACTTGCATCTGATGACTTCTCTGTGGTTTCATCGCCACATGCACC
TGGTGGTGAATCCTTTGCACCTTCTATATCGATATCATCATCATTATCCTCTTTCTCGTTTTGAACCTCACCATTGGGTAACATGC
TAGCTTCCTCTGGGTTCGAAGAAGGCGCAGTGGACTCGGATGTCTCTCTCCATTCGACCCAAGCTGGTGATTTTTCGGCTTCTGGT
TCACTCGGGGTTTCAGAAGGATTCTTTGATGTAGAATCCTCCTCTGTTTCCATATCAACAGGCGGGGAAGAAGGGGAGGCTACACT
GTCCTTGAAGTCATCGGCCGCTTCACCTATGACGACATCATCATCATCATCCTCATTAGCATTGGGTGATGGGGAAGCCATTGAGT
GCTCATTCGCAACTTTTTCATCATCGAAAGCAAACCAGTTCGAATTTGTGAAGAAGAACTCTCCTGATCATCTTCAAGGCGCAAAG
AAGATATGACAACTTCTGCAGATTCGTCATCAAAGTAGACATCCTCATCATCGCCGCGTTCCATAGAGCCTTGGGTCTCATCCATG
TCATCATTGCTGTAAACGCCATATCTAAAGGCCTGGCTCAGGTTGTTTGCTAAGGCTGCCACATCATAGTCTCTATCGTGGTAATC
ATCATCATCGCTATCTCTATTACGATCATGGAGTGAAGTTGGCCTCACGCAAGCCCAAGAGTAAACATTTTCCAATGTATTACGCT
TTGACAAAACATCTGTCTGCCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174335 SIT4 phosphatase-associated-like protein [Arabidopsis thaliana]5102e-049
XP_002890872 SIT4 phosphatase-associated family protein [Arabidopsis lyrata subsp. lyrata]5102e-049
NP_001185115 SIT4 phosphatase-associated-like protein [Arabidopsis thaliana]5102e-049
NP_001185116 SIT4 phosphatase-associated-like protein [Arabidopsis thaliana]5102e-049
XP_002440377 hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]4636e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701731e-011

TrEMBL top hits (Blast detail)Scoree value
C5YX01 Putative uncharacterized protein Sb09g0305804634e-044
B8AAT1 Putative uncharacterized protein4609e-044
B9EXR9 Putative uncharacterized protein4609e-044
Q0JLN7 Os01g0585700 protein (Fragment)4609e-044
C5XPF3 Putative uncharacterized protein Sb03g0262404545e-043

Arabidopsis top hits (Blast detail)Scoree value
AT1G30470.1 SIT4 phosphatase-associated family protein6156e-064
AT1G07990.1 SIT4 phosphatase-associated family protein3531e-033
AT2G28360.1 INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1431 Blast hits to 1107 proteins in 182 species: Archae - 2; Bacteria - 108; Metazoa - 552; Fungi - 305; Plants - 89; Viruses - 18; Other Eukaryotes - 357 (source: NCBI BLink).3451e-032
AT3G45190.1 SIT4 phosphatase-associated family protein2868e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
191  20%
 
111  20%
 
91  20%

Unigene MembersMember information