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Information for unigene UN22896
| FASTA Sequence |
| Unigene ID: UN22896 | Length: 2075 |
SSR | SNP | GCGTTGGCCTTCTCAAAACCAAAACAAAAGATACTCGAAGAATGTTATGTATTTCTTCATTATACAATCTACAATTAAAACAACGA
GTTCATTATTTTACCATCCCTAGTGTTTCGAGTTCAACGATAGAGCTCGAACGTGTATAAAAGAGCATAGTGGTATAGTAAGTGAT
TGGTGTCTGAGCATACAAAACACTGCCAAGTGTCTCTGTAACCAAATGTGGAAGATATGGCATTGTCTAGAAGATGTAGTAAACCT
AGACAAACTCTTAAGATATCAATGAAAATTGCATTGTTGCATAAAAGGGTGACTGTAATCAACGTACTTCTCCCACAGAGGTTTGT
ACTTCTCCATCCCGATCTTCAACCACGGCTTTAAGTTCCCATTGAAGTGGAGAACCGCTCCCTTGTCTATCACACGAGTATCCACA
TTGGCGTATCCCAGTCCCAGGACATGCCACGACGACTCTAGTGCCTCCGTTAACCCGTAAAACGTCAGTAGCCCTGGAGGCAGTGT
CCCAAGTTTCCACAAGGTCCGGTCCACGTTCTTTTCTTGCCAGTAGTGGTATATTCCTGTCACATTTCTCTTCCTCCACTCAACTA
AATCAAAGACGTTCATCCCAAAGGCCCATCCGCACGCATCTGGATCAAAGTGTGAGCGAATCAGAGGATGGGAATAGTTCAAGTAC
TTGTGGTACCGGTGGAACGTCTCCATGCACGTCTCAACAGCCCCGTTCACGTTTCTGTTCAAATCGATCGAAAAGAGAGCAGAAAG
GTCCTTCTGCACTACAACGTCATCATCAAGAAAGACCATCTTCTTCAGCGCAGGAAACACTTCAGGGATGTAAAACCTGAGATGAT
TGAGCATTGAGAGATACTTGGGGTTTCTGAACTTGATCGGTGTGCGTCCATCGTCGTTGTGTCCAGAGAAATAGTAGCTCTGCGTA
TCGGAGTCTTGCAGCTGCTTGAGGACGGGGACATAAGAAGCATTAAGCCATTTGAAATCCTCAAACTTCTGAACCTCAACAGTGAC
TCCTCTGAGGTTATCCATGTTCATAGCAAACCACGACTTCATCGCAGCGTAGTTGATCTCGTTAGTGACAAGATGAAACACGAGTT
TCTCAGGGGCCTTGGAGTTGAGAGCAGTGGAATTCACCACGACCGAAGTAGCAACAATGTTATCAGAAAACACGCAGAAATGGTGG
AGACTGTTGTCAGTGAGCTTAGAAGCAACAGCGTAGCTTCTCTCGGCGAGCTTCCCCTGCAACTCAGAGTTCTGAAACCACTCAGT
AGTGAGACGAACACCGAGGCAGTAAAGACTCTTGGGCACTTCCTCAGCAGCGATCTGAGCATACTTAGCGCTCTTCTCAGTGACAG
AACTCATCTGCCCCTCCAAAGACTGGATACTAGCCTTGAGCCTCATGATCATAGTGGCGCTGTCGTAATGAAGCTGCTGAGCTTGG
TAAAGCAAGACAGCCATGTCGCGGATAGTGGGTTCAGAGTCAAGAACCGTCAAGGGACGTCTGGAAGCAGCAGCAGTGGAGAGAAG
GAGCTGAGAGTTGCGGATCTGAGCGCTAAGGTCCCAAGCGAACTGAAGGTTTTTGCTTTCTTTAGCAATGACAACAAAGGCTTTAG
CTAAAGCGATCTGGTCGTTAACTTGGCGAGCAAAGGAGGTTGGGCTCAACATTTCTTCAGTCATGTTCATGCCTTCGACGAGCTTT
TCGTGACGGTAACGCCGCTCGGGAATGGAGGGTCTAGGTTCGATTTGAGTAGCTTTGGAGAGGATGAGGATGAAGAGGGTGACGAC
AATCGCAGAGAGGACCCACCAGACGACGTTCGAGATCTTCCTCCGTCCTCCCGCCCTCCGGAAATCCAACCCTCTCCTCCTATTCA
TACTGAGTGAGAAGCGCGCCGCGAGGTGAGGAGTGATTGAAACCCTAAAACCCAACCCAAGCCCAGATCTGATTTGACTGATTGAT
TGATTAGTGGCGAGTGTTGTTGTTGTTGTCAGTTCCGATCTGGGAGCCGAGCGGCCAGCTTCTCTCTTTGTCTTCTCTTCTTCGCT
GGAGGAAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565485 alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] | 2539 | 3e-284 |
| XP_002884222 GAUT10/LGT4 [Arabidopsis lyrata subsp. lyrata] | 2533 | 1e-283 |
| BAD44626 unknown protein [Arabidopsis thaliana] | 2531 | 2e-283 |
| XP_002329358 glycosyltransferase, CAZy family GT8 [Populus trichocarpa] | 2224 | 9e-248 |
| XP_002319923 glycosyltransferase, CAZy family GT8 [Populus trichocarpa] | 2209 | 5e-246 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKT6 Probable galacturonosyltransferase 10 | 2539 | 1e-285 |
| Q949Q1 Probable galacturonosyltransferase 11 | 1519 | 2e-167 |
| Q93ZX7 Probable galacturonosyltransferase 4 | 1222 | 6e-133 |
| Q9LE59 Alpha-1,4-galacturonosyltransferase 1 | 1206 | 4e-131 |
| Q0WQD2 Probable galacturonosyltransferase 3 | 1166 | 2e-126 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9N289 Glycosyltransferase, CAZy family GT8 | 2224 | 6e-248 |
| B9I693 Glycosyltransferase, CAZy family GT8 | 2209 | 3e-246 |
| B9RW65 Glycosyltransferase QUASIMODO1, putative | 2089 | 3e-232 |
| C0P3I7 Putative uncharacterized protein | 1813 | 3e-200 |
| B4FRZ8 Putative uncharacterized protein | 1809 | 8e-200 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G20810.1 GAUT10 (GALACTURONOSYLTRANSFERASE 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 2540 | 7e-287 |
| AT1G18580.1 GAUT11 (Galacturonosyltransferase 11); polygalacturonate 4-alpha-galacturonosyltransferase | 1519 | 2e-168 |
| AT5G47780.1 GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1222 | 5e-134 |
| AT3G61130.1 GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1206 | 3e-132 |
| AT4G38270.1 GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1169 | 7e-128 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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