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Information for unigene UN22908

FASTA Sequence
Unigene ID: UN22908Length: 745  SNP
TTTTTACCTATATACATTCAGAAGAGCTCTTTGAGTCGTGAATCAGAGGCAGAGACAGTTAGAGAGAGAAATAAAGAAATCTTTGG
AGGAAGGATGCAGATATTCGTGAAAACCTTGACCGGAAAAACCATAACCCTCGAAGTTGAGAGCAGCGATACCATCGACAATGTCA
AATCCAAAATCCAGGATAAAGAGGGGATACCACCAGATCAACAGAGGCTAATCTTTGCTGGGAAACAGCTAGAGGATGGCCGAACG
CTCGCTGACTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCTTGAGGCTTAGGGGTGGCACCATGATCAAGGTCAAGACTCT
CACCGGCAAAGAGATCGAGATTGATATCGAACCTACCGACACTATCGATCGCATCAAAGAACGTGTTGAGGAGAAAGAAGGCATCC
CTCCTGTCCAACAAAGGCTCATCTACGCTGGAAAACAGCTAGCTGACGACAAAACGGCGAAAGACTACAACATCGAGGGAGGCTCT
GTTCTTCATCTGGTCCTTGCTCTTAGAGGTGGTGGTTTTGGTCTTCTCTGATAAGTTAGCTCTTTTTTCTCTCCTGAGTTTTATCT
TTTCTATGACTTGCAATTTGGATTACTATGGGGTTTGGATCAGTTTACCAATAATCTCTCCAATATCGGATCAAAAATAATATTTA
TTTGGATTTGGTTACTTTTGATGAATATCTTTTCATTTCAAGAAAAATGATTCGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564379 NEDD8-like protein RUB1 [Arabidopsis thaliana]7618e-079
NP_001058221 Os06g0650100 [Oryza sativa Japonica Group]7582e-078
NP_001063199 Os09g0420800 [Oryza sativa Japonica Group]7572e-078
XP_002437367 hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]7572e-078
P0C073 RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=DaRUB1; AltName: Full=Ubiquitin-related protein 1; Flags: Precursor7563e-078

Swiss-Prot top hits (Blast detail)Scoree value
Q9SHE7 NEDD8-like protein RUB13852e-036
P0C030 NEDD8-like protein RUB13814e-036
P0C031 NEDD8-like protein RUB23814e-036
P0C073 NEDD8-like protein RUB13806e-036
P59263 Ubiquitin3762e-035

TrEMBL top hits (Blast detail)Scoree value
Q0DAI8 Os06g0650100 protein (Fragment)7581e-078
A2Z1B6 Putative uncharacterized protein7572e-078
B7E7D4 cDNA clone:001-101-G08, full insert sequence7572e-078
B8B0S9 Putative uncharacterized protein7572e-078
C5XCV9 Putative uncharacterized protein Sb02g0248807572e-078

Arabidopsis top hits (Blast detail)Scoree value
AT1G31340.1 RUB1 (RELATED TO UBIQUITIN 1); protein binding7651e-081
AT2G35635.1 UBQ7; protein binding7499e-080
AT5G03240.1 UBQ3 (POLYUBIQUITIN 3); protein binding6306e-066
AT5G20620.1 UBQ4; protein binding6306e-066
AT5G03240.2 UBQ3 (POLYUBIQUITIN 3); protein binding6306e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  14%
 
94  29%
 
113  21%
 
61  7%
 
84  29%

Unigene MembersMember information