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Information for unigene UN22912

FASTA Sequence
Unigene ID: UN22912Length: 1402 SSR 
GGACAAGTATCTTATCTTTATAGCTTTTAAAGATATACAAAAGCTTTCTTCAGATTCACAATCTCATCACACACACACAACCCTTC
AAAAAAAGAAAGAAAGAACAGACAAAAGATCTAAAGAATAAACAAGAACCCTACTACAATCAAATCAAGACCGAACCAAGAAGCAA
AAGTTTCCTCTTATATTCTCTTCTCTCAAAAACTTCTCCTCTTCTTGTTCTTGTAAGACTAGGGTTTTGTTTTATTGTCCGGAAGA
AAAGATCTTTCATCAGAAAAAGCAATACCAAACTCATGTTTGTGTTTGTCTGAATATAGATAAACATTGACCTCCCCTAATAATAA
GGTTACATATATATAAAAGAAGAAGAAAAAATGGGAAGGGGAAGGGTAGAGCTAAAGAGGATAGAGAACAAGATTAACAGACAAGT
CACGTTCGCTAAGCGTAGGAACGGTTTGCTGAAAAAAGCCTATGAGCTTTCTGTTCTCTGCGATGCTGAGGTTTCTCTCATCGTCT
TCTCCAACCGTGGAAAGCTCTACGAGTTCTGCAGCACCTCCAACATGCTCAAGACACTGGAAAGGTACCAGAAGTGTAGCTATGGT
TCAGTTGAAGTCAACAACAAACCTGCCAAAGAACTCGAGAATAGCTACAGAGAGTATTTGAAGCTGAAAGGTAGATATGAAAATCT
GCAACGTCAGCAGAGAAATCTACTTGGAGAGGACCTTGGACCTCTGAATTCAAAGGAGCTAGAGCAGCTTGAGCGACACTAGACGC
TCTCTTAAGCAAGTTCGCTGCATCAAGACGCAGTATATGCTTGATCAGCTCACTGACCTCCAAGCAAGAGCATATCTTGCTTGAAG
CCAATAGAGCTTTGTCATGAAGCTGGAGATATGATCGGTGTGAGAAGTCACCATATAGGAGGGGCGTGGGAAGGTGGTAGTGATCA
ACAAAATGTTGCCTATGGACATCATCAGGCTCAGTTTCAGTTTCAGGGACTATTCCACTTTCTTGAATGTGATCCCACTTTGCAAA
TGGGATATAACCATCCAGTGTGTTTTGAGCAAATGGCTGTAACTGCGCAAGGTCAGTCCTCCCAACCAGGAAACAACGGCTACATC
CCTGGCTGGATGCTGTGAGAGTGATAATTCTATCCCCACCTCAATAAGGAATAAGGATCTTTAAGCATGCAAGTAGTGGGTTTTTG
ATGATGAGGATGAGATGGATTTTATGAATAAGTATGATTTTGTGTTTATGTATGCTGCATAATTAAGACTTTTGATTTATAAACAT
AAGTGGCTATAGCTGTAATAGCCTTGGACATATTTTTTTTGTTTCAGAAGATGTTTGTGCGCGCCTTTTGAAACCTTTTGCTTATA
TATAAACGGATGGATTGTAATGCGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAU82009 SEPALLATA2 [Arabidopsis thaliana]9271e-097
XP_002884314 SEPALLATA2 [Arabidopsis lyrata subsp. lyrata]9252e-097
NP_186880 developmental protein SEPALLATA 2 [Arabidopsis thaliana]9234e-097
AAO42085 putative floral homeotic protein AGL4 [Arabidopsis thaliana]9225e-097
ABD60322 SEP2 [Boechera stricta]9135e-096

Swiss-Prot top hits (Blast detail)Scoree value
P29384 Developmental protein SEPALLATA 29232e-098
P29382 Developmental protein SEPALLATA 18773e-093
Q03489 Agamous-like MADS-box protein AGL9 homolog5924e-060
Q42464 Agamous-like MADS-box protein AGL9 homolog5422e-054
O65874 MADS-box transcription factor 15342e-053

TrEMBL top hits (Blast detail)Scoree value
Q5XXL5 SEPALLATA29279e-098
Q5XXL4 At3g023109233e-097
Q84WB0 Putative floral homeotic protein AGL49223e-097
Q1KV04 SEP29134e-096
Q5XXJ5 SEPALLATA2 (Fragment)9062e-095

Arabidopsis top hits (Blast detail)Scoree value
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor9284e-100
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor8811e-094
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor7797e-083
AT1G24260.1 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor5162e-052
AT1G24260.2 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor5162e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  14%
 
82  29%
 
72  29%
 
111  14%
 
121  14%

Unigene MembersMember information