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Information for unigene UN22921
| FASTA Sequence |
| Unigene ID: UN22921 | Length: 1332 |
| SNP | GGATACTGAAAATTTTACCAAAACAAAATGGTCTCTTGACGGAATCTGTCCACAACTAGTCAACGTTTTGTAATAGTCAAAAACCG
GTTCACAATAACATCAAACTTTGTTTCTCAAACCTGAAATGTTTCATATGCTTTCGTGTCCCATGCAGGACAATAAACTGTGACTT
TTGTCTTTCACTGTTGCTCCATTTGTTCATTTCCCGTCTCTGCAACGAGACGAGCACTTTCCTTCTCAAAGAAATCGAATTCTTGG
AGAATCTTAGCAAGCTTTGTCGCGTTGTCTTCTTTTATATTCGCAGGGACCTTCTCTTCGTACCCAGACGCGCTCATCACCTTCTG
CAACTTCTCCTTTTGTTTTTGTAGTTCGTCAATCTTGTTTTTGATCTTTTCTTGCTCAGCTTCTGTGTTAATGGCTCTGTTAACTT
TGAGATATACCTTAAGGTTCTCATTCACCGTCTCAACTGCAGATCCAGGTGGGGCTGCGTGTTCTCCCTTTAACAGAACCTCTAAG
GACGATAGATTTGCAAGCGTTCTGATCTCCAACTCATGAGATTTTACAATCTCAGATGTTAAGTTGTTTTCACACAGAGCAAAAGC
AGGTAACCTTTCATTCTTCTGTTTCTCCAGCAACCCAGCCCGAAGCGCCCTCAGGCACTTCACGCTCGATAAAACGGTTTCCATTT
CAGTCTCCGCTTTTTCATTTGTCCAATTCTCTACCGCAGATGGGTAGTCACATATCATAATAGAAGCCTTCCTTTCAGTGTTTTTG
GGTGAAGGCAGCCGTTGCCATAGTTCTTCAGTAACAAAGGGCATTAGCGGGTGAAGCAGTCTCAAACCAGTCTCCAGAGATACCCA
GAGGGCATGTTGTGCATGAGCCCTCTCTGAAGCAAACGCCGGGTTGTCACCAGCAAAATAAGGCTTGATAGCTTCAATGTACACAT
CACAGAATTGATACTGCCACCATGCGTATACTGTGTTGGCTGCATCCGAGAACTCAAATGCATTCAGTGACTCCACCGTCTTTGAT
ATTGCCTTGTTTAGCACCGAGAGAATCCACTGGCAGCTGAATGGCATCGTTTCAGGGCTTAGAGTCAGCGGAGGCGAATAATCATC
GCCAAGCCTCATCATCGCAAATCTGACGGCGTTCCACAGCTTATTACACCATTGGCGGTAACCAACCACTCGGAGGATGTCCAAGT
TTATTTTGTCAGACTGAGCAGTGTAAGAGACGAGTGCAAAGCGAAGAGCGTCAGCACCACATTCAGAGATACCATTTGGAAAGTCC
TTCACTTGTCCTTCTTTGGCAACAACCAGCTCTTTTGGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892818 hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp. lyrata] | 1823 | 2e-201 |
| AAF63175 T5E21.11 [Arabidopsis thaliana] | 1788 | 2e-197 |
| NP_172913 Valyl-tRNA synthetase [Arabidopsis thaliana] | 1788 | 2e-197 |
| AAL32771 similar to valyl tRNA synthetase [Arabidopsis thaliana] | 1788 | 2e-197 |
| AAB49704 valyl tRNA synthetase [Arabidopsis thaliana] | 1775 | 6e-196 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93736 Valyl-tRNA synthetase | 1788 | 7e-199 |
| P49696 Valyl-tRNA synthetase | 625 | 5e-064 |
| Q04462 Valyl-tRNA synthetase | 605 | 1e-061 |
| Q86KU2 Probable valyl-tRNA synthetase, cytoplasmic | 599 | 6e-061 |
| Q9Z1Q9 Valyl-tRNA synthetase | 596 | 1e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NPT2 At1g14610 | 1788 | 1e-197 |
| B9SWL0 Valyl-tRNA synthetase, putative | 1369 | 5e-149 |
| B9HG11 Predicted protein | 1350 | 7e-147 |
| B9H5N2 Predicted protein | 1291 | 5e-140 |
| B9FAQ6 Putative uncharacterized protein | 1076 | 4e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14610.1 TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / valine-tRNA ligase | 1788 | 7e-200 |
| AT1G27160.1 valyl-tRNA synthetase / valine--tRNA ligase-related | 602 | 2e-062 |
| AT5G16715.1 EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / valine-tRNA ligase | 279 | 6e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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