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Information for unigene UN22923
| FASTA Sequence |
| Unigene ID: UN22923 | Length: 1268 |
| SNP | GATAGCAGATGCTAGTAAAAGATTGCATGACAAGATGACCAATTTCTTATCGAAAAACAAAGCCGCTCAGCTTCAGCATGGTAAGA
GAGATGGAGGTGAGCTTTCCACGAGGGATTTGCAGAAGATGGTTCAAGCATTGCCACAATACAGTGAACAAATTGACAAGCTGTCT
CTCCATGTGGAGATTGCTAGAAAAATCAACGACCTTATCAGAGAGCAGGGACTGCGGGAGCTTGGACAACTTGAACAAGACCTTGT
CTTTGGTGATGCTGGGATGAAGGATGTGATTAAATATTTGAGTACTCAAGAGGAGGCAAGTCGTGAAGGTAAGTTACGCCTGCTGA
TGATCCTCGCAACAATTTACCCTGAAAAGTTCGAAGGTGAAAAAGGTCAAAATCTAATGAAGCTGGCAAAACTCTCATGTGATGAC
ATGAGCGCTGTGAATAATATGAGATTGCTTGGTTCAGCCGTTGATGCTAAAAAGAATACTCCGGGAGGTTTCACTTTGAAGTTTGA
TCTTCACAAGAAGAAGCGAGCTGTCAGGAAAGAGCGCCAAGAGGAAGCAGCATGGCAGCTATCTCGTTTTTACCCCATGGTTGAGG
AGCTCATCGAGAAGCTTAGCAAAGGAGAATTGCCAAAAGAGGATTTCCCATGCATGAACGACCCAAGCCCGAGCTTCCACGGATCA
ACTTCGCTTTCTTCATCAGCAAGTAGTAATCAAGGTCAAGCTGCTGCTCAGTCCATGAGATCAAGACGCACACCAACATGGGCTAA
ACCTCGAGGTTCAGATGATGGATACTCAAGTGATTCGGTGTTGAGACATGCGTCTAGTGATTTCAGAAAGATGGGACAGCGAATAT
TTGTGTTTATTGTTGGTGGAGCGACAAGATCAGAGTTAAAAGTATGCCACAAACTAACCACGAAACTTAAAAGAGAAGTTATCCTC
GGGTCTACAAGCCTCGATGATCCTCCACAGTTCATAACGAAACTGAAGCTTCTGTCTGCAAATGAGCTATCTATAGACGATCTCCA
AATATAAGAATTCAGATCTCAGTTCAAATCATTGTCCTTGCTCTTTGATATCTCCCATTCTAATTTGTAACCAAGTTGAAGGCATG
TAAAAGGGATGAAAAAAAACAATCAGATTTTGAGATCATGACTGTAAGTTTACCCTTATTGTTTGTCGTCTTGAGATGTAAAAGCA
ACTCATAACGTTGACTTCTATATCTTTGGCTATTGTCTTGTTAAATTTGATTGTGTAAATTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889930 hypothetical protein ARALYDRAFT_471384 [Arabidopsis lyrata subsp. lyrata] | 1655 | 4e-182 |
| NP_563905 SNARE-interacting protein KEULE [Arabidopsis thaliana] | 1644 | 8e-181 |
| AAK01291 KEULE [Arabidopsis thaliana] | 1641 | 2e-180 |
| AAF79632 F5O11.8 [Arabidopsis thaliana] | 1439 | 5e-157 |
| XP_002329890 predicted protein [Populus trichocarpa] | 1365 | 2e-148 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5X3 SNARE-interacting protein KEULE | 1644 | 3e-182 |
| Q7XWP3 Probable protein transport Sec1a | 1141 | 7e-124 |
| Q9SZ77 Protein transport Sec1b | 1135 | 4e-123 |
| Q9C5P7 Protein transport Sec1a | 1085 | 2e-117 |
| Q5VNU3 Probable protein transport Sec1b | 1075 | 3e-116 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9N3L8 Predicted protein | 1374 | 1e-149 |
| B9GVT2 Predicted protein | 1363 | 2e-148 |
| B9RBT6 Plant sec1, putative | 1310 | 3e-142 |
| B8AH60 Putative uncharacterized protein | 1243 | 2e-134 |
| B9EZS5 Putative uncharacterized protein | 1235 | 1e-133 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12360.1 KEU (keule); protein transporter | 1645 | 2e-183 |
| AT4G12120.1 SEC1B; protein transporter | 1136 | 2e-124 |
| AT1G02010.1 SEC1A (SIMILAR TO ELECTRON CAREER 1A); protein transporter | 1085 | 2e-118 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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