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Information for unigene UN22931
| FASTA Sequence |
| Unigene ID: UN22931 | Length: 2485 |
| SNP | GGGCGGTTACTCTCGACCTTCTTCTTCTTTTCTTCAGAAACAAACAAGATGATGAACACACTTCAAGCATTTCAGACAACTGTAAC
ACCAAACTTCCATGTTCTATTCAATCCCCCAAGACATTCCATTTCTCGAACCCAATTCCTCTGTCTCTCGAAATCCAGAGATGGAA
ATCCAGATTCAGAGTCTGATCCGGAACCTCCAAAACCCGAAGGTGATACCGAGAGACAAGAGCTCTTAGCCAGGATCGCCATGCTT
CAAACATCGAAAGTCCGTTTAACTGATTTCTTGGACGAACGATCAGATTATCTCACCAAGTTTGCGGAAGAAGCCAACGCAGAGTT
TGATAAGGTTGGAGAAGACGCCATGAAAGACCTCGACGAAGCAAGCTCAAGGATACTAGAGAACATCGAGAGCAAGATGCAAGCTT
TTGAGGAATTTGTGGGACTTAACAGATTGGAGATAGAGGAGAACGATAACAAGTTGGCTGAGTTTGAAGAGAAGATTGTGGAAGAT
AGGAACGAAGGATTGTTTTTCAAGAGCTTCCGTGATAAGAAGCCTGTGGATGCAGAGGAAGCTAAAGAGGAGACTCAGAGAATACA
AGAAGTAACCAAAGAAAGTGCAGGATCAGAGTCAAGAAGGAACATTTACCTCGGTTTAATTGGGATCGTGGCTTTAGCAATCGCAG
ATTTGTTTGTTTTTTCACCGGATTGGAGAAAAGTAGCTGTTTTTGGAGCTATCCTTATCCCACTGCTCACTCAGTTTGTGTACGAG
CAGACATTGTTTTCATAAGAAGCAGACAAGGGTAAAGGAAACAAGAAATAATGAATAGTACCGACTCTGTAACAATGTAAAGTAAT
ACAGAGTGATAATGCATGATTAGTTTTTCTTTTAACCGACGAAAGGTTACAGGAATAAAGTAATACATAAACTTTATAAACTCAAA
AGAAAGATTATCTAAAGATCTTTAACAAACAAAAAAGATATCTAATACTTTAGACGAGCTATTTAAGGCGATACTTAGAGCTCAAG
CACTTAGCATCACAAGTCTCTGTTGCGGGAAAAGGACGGGAGGGGCACAGCTTCTTGAGGTCGTAGTATCACGAGCAGACCGAACA
TCCCGAGCATCGGGAGGACAAGCAGCCACTTCAGAAGCTTGTAATAATACATATGGAATGTTAGAGAGAATTCGTCTGAGAAATGG
AGTCCATTCTTGTCCACCATCTCCACCATTACAGTGCCTGTTGTCCTCACTCCAACGGTTGGTAGTTTTATTCTGTATTTTCCTGG
TCGGTCATAGATCTGGCTCTGCTTTATCCTCCTATCTCCCTGGTAATTGCCTGGTACCAACAGCGTCGTTGTAACGTTATAGGGCG
CTTGTGAACCAGATGGGTATCTGTAGTTATCAACAATCTCAATCTCAGCCCAGAAGTTTTTGCCTTCCTCATCACGGAAGCCTCTG
GTTGAATGCGTGACAAAAACACCTTCACGATCGTAACGGATAGCCTTATTGTTCATCCCTTGATCAGTCGATCTCCAAGCCTTGAG
GGGATGGTGAGGAGAAGGCGTGGAGAAGCAAAAGACGTTCCCGTTCATAGTTGAGACGATGAGATCAAGATCATCTCCACCGTCAA
CATTATCAGCCAAGACCATGCTGTATGAAGTTTCACCAATATCAACAACGTCAGCGCACGAGGTGGGCCCATCTATGAGATACATG
TAACCGTCAAAGGATGTGGTAACAATGGTAAGTCCCTTCTTTTTGTCACCTCGCTTGTTCAGATCAACAAGAAGAACTTGGTTCAT
CACTCTTCCATGGGTTCTGTACGGGTAAGGACGGACAATCGAACCATCCTTGCCACTCAGAACGTAAATGTTTCCTGATGTTGTGG
GAACCACGACATCAGTATGTCCATCACCATCAACATCGCCTATCGAAGGACCCTGAGGAACAAGACTCTTTAGATGTACTTCCCAA
ATTTCCACTCCTTGAGTGGTCCATGCTGCTACATTTCCGTGGGAATCTGTTGTTACAAGTTCAATCTTTCCATCGTCATTTATATC
AGCTGCAACCACTGCCCCTTGAATTTCGGCCATTTCAAGTGGGAATTTTTCTCTGATGTTTCCACGGTGGTCCATGGCGTAGAATA
AGCCAAAGGAAGTTCCGACAAGGATATCCAAGTAACCATCGCCATCCAAGTCAACAACCGTTGGGGAAGAATAAATATATGCACGG
AAGTTTGCGTTATCCGTACTCAAATCTAGCTCTTTGACCCATTTAACTTGTTTAGTCTCAAGATTGAAAACCACAATTGAACTAGC
AATATAGTTTTTGATGTCAATACTACCAAGCTCTTTCAGATGTTCTGGATTGTCATAATACTCAGGGTCGAAGAAATAGGAAACAG
CAACAACCATCTCCTGTATTCCATCTTTGTCTATGTCAGCAATTACAGGAGTGCAAAGTATATGTGCGTCAATATCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884712 hypothetical protein ARALYDRAFT_897057 [Arabidopsis lyrata subsp. lyrata] | 2450 | 7e-274 |
| NP_566343 defective in exine formation protein (DEX1) [Arabidopsis thaliana] | 2444 | 3e-273 |
| AAO64188 unknown protein [Arabidopsis thaliana] | 2444 | 3e-273 |
| AAG31444 defective in exine formation [Arabidopsis thaliana] | 2444 | 3e-273 |
| AAG31445 defective in exine formation [Arabidopsis thaliana] | 2444 | 3e-273 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84TH7 Defective in exine formation (Fragment) | 2444 | 2e-273 |
| Q9FV29 Defective in exine formation | 2444 | 2e-273 |
| Q9FV30 Defective in exine formation | 2444 | 2e-273 |
| B9SPE1 Putative uncharacterized protein | 2233 | 7e-249 |
| Q10BA5 Defective in exine formation protein, putative, expressed | 2023 | 1e-224 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09090.1 DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding | 2445 | 9e-276 |
| AT3G09090.2 DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding | 1915 | 3e-214 |
| AT3G09050.1 unknown protein | 1125 | 1e-122 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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