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Information for unigene UN22940

FASTA Sequence
Unigene ID: UN22940Length: 1260  SNP
CCACTCCTTTCAATCTTCTTTCCTCTACCATACAAAATAATAAATGCCTTACTTAAAAAGAGTTTAAACAAAGAAAAACAATACGA
AAAAGACGCACACCAATGGAAAACGAAGGAGCATTTCCATGTGACAACACATAGCAGAAAAGAGAAGAAAACTAAACTACACTTTC
TTTTGCGACTCTTGACTTTGATTAGATTAGCAGACTGCTTATAAACTTATCTTTATGACAAGTAAACTCAACCCTCCGTAAGAAAT
TTCAGGTTTTTACTAATCTAATTTATCTCCTCCATTCTGCTTGTTGCTCTTCTTGGACTCCTCCTTTATCTGCTGAAGAAGCTTCT
TTTGGAATCGGTAACCTTTGTCAGTTCCATAGATGTAATCGCAGTAAGTGAAAACTGAAGCAAAGTTGCTTTGGCTTTGTCCTCCA
ACGTAATGATGGTAATCATGATACTCAGCTCCACCATAGAACGGAATGAATTTCGTCAGAGTCCATGGAAAATCATATCCGCTGTG
AGTCTCAATGGCTTCAATCTGGCGTAAAGCAATCCACAGCCAGAAGGTAATCATGTGACCAGGAGCAATAGCAGGTCCAAGAAAAG
TCGGAACCCCAAGAAGCAAAACCTCAGCCCAATGGGCATAAGGAGCAGCATACCCAATAGGAGCAGTGTACTCATGATGGATATGA
TGAATCTTCTCATAACCCCACTTGCTATGAAAGAATCTATGAACCCAATAGTTCGTATAGTCCTCTACCAAAAAGTAAACCACTAA
CTGCGCCGCAATCTCCCCGAAAGACGGTAACGGCAACCCACTTCGAATCTCAATCATCTGGATGGAAGGATAAGAGACGAGCTGGA
GAGGGCCGACGACGAGGAGGAACATCTTCATGACGTCTCGGTAGCAACGGAACATGTCGGAGAAGGAGTTCTTGACCTTGGGCTGG
ATCTTGTACCGGTCGAACCAGGCGGATCGAGCCAATTCGAGGAAGACGAGAGGGAGAGGGACGAGGGAGAAGATGAGGAAGAGGAA
GAGGATGTTGTGGCAGTAGAGGTAGTAATCTGACTTCGTGGCGGAGTATTCGAACCAGAGCGTCTCCAGGGTCGTTAGGTTTCGGC
CTAAGGCCATCGAGGCATCTTCGATCGTTGCGTAAGGGATCATTGTGTGTTCCGCGAGATGATCTCGTTGACGTGGTGGGATCCAG
AGAGATGAGAGAGTGGAGAGCGATGAGAGAGAGAGGAGAGTGTCGTTGTTAGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567670 sterol C4-methyl oxidase 1-2 [Arabidopsis thaliana]14521e-158
XP_002872644 hypothetical protein ARALYDRAFT_911602 [Arabidopsis lyrata subsp. lyrata]14493e-158
AAK61361 putative sterol 4-alpha-methyl-oxidase [Arabidopsis thaliana]14441e-157
AAM65428 putative C-4 sterol methyl oxidase [Arabidopsis thaliana]14395e-157
AAM64961 putative C-4 sterol methyl oxidase [Arabidopsis thaliana]14386e-157

Swiss-Prot top hits (Blast detail)Scoree value
Q55D54 Putative C-4 methylsterol oxidase DDB_G02697884803e-047
Q55D52 Putative C-4 methylsterol oxidase DDB_G02709464624e-045
Q9UUH4 C-4 methylsterol oxidase4231e-040
P53045 C-4 methylsterol oxidase3971e-037
O59933 C-4 methylsterol oxidase3943e-037

TrEMBL top hits (Blast detail)Scoree value
Q1EC69 At4g2275614521e-158
Q8GT72 Putative sterol 4-alpha-methyl-oxidase14449e-158
Q8LAD9 Putative C-4 sterol methyl oxidase14393e-157
Q8LB57 Putative C-4 sterol methyl oxidase14384e-157
Q8L7W5 AT4g12110/F16J13_18014376e-157

Arabidopsis top hits (Blast detail)Scoree value
AT4G22756.1 SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic14534e-161
AT4G12110.1 SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic14382e-159
AT4G22753.1 SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ catalytic12554e-138
AT1G07420.1 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase6075e-063
AT2G29390.2 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase5824e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  38%
 
92  13%
 
62  13%
 
83  19%
 
113  19%

Unigene MembersMember information