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Information for unigene UN22953
| FASTA Sequence |
| Unigene ID: UN22953 | Length: 1554 |
SSR | | TGTCATCCGCCGCCGCCGCCGCAAGTCCATCCCTTTCACTCCTCAAGTCAACCGGAGCCGCCGTCGCTTCATCCGCCGCAACTCGA
GCACGCGCCACCCTTCTGCCCGTCTCCTCCAAATCCAAATCCATCTCCACTCGTCCTCTCGGCTTCTCCGCCGTCCTCGACTCCCG
CTTCACCGTCCAAGTCTCCTCAAAGGTCCACTCTTTCCGCGGCGGCAGAGGCACCAGAGGAGTCGTCTCCATGGCGGCGAAGAAGA
AGAGCGTCGGAGACTTGACCTCCGCTGATTTGAAAGGGAAGAAGGTCTTTGTGAGAGCTGATCTGAATGTACCTCTTGACGACAGT
CAGACGATCACCGACGATACGAGGATCCGTGCCGCCATTCCGACGATCAAGTACTTGATCGACAATGGCGCTAAAGTCATCCTCTC
CACTCATCTGGGAAGGCCAAAGGGAGTGACACCGAAGTTCAGTTTAGCTCCTCTTGTCCCTAGGCTGTCTGAGCTTCTTGGTATTG
AGGTCAAGAAAGCTGACGACTGTATTGGTCCTGAAGTTGAAAGCTTGGTGGGTTCTCTTCCTGAAGGTGGAGTTTTGCTTCTTGAG
AACGTTAGGTTTTACAAGGAGGAAGAGAAGAACGATCCAGAGTTCGCCAAGAAGCTTGCTTCGTTAGCTGATCTCTATGTCAATGA
TGCTTTCGGAACTGCTCACAGAGCTCATGCTTCCACTGAAGGAGTCACTAAGTTCTTGAAGCCTTCTGTTGCTGGCTTCCTTCTCC
AAAAGGAGCTTGATTACCTTGTGGGAGCGGTTTCAAACCCAAAGAGACCGTTTGCAGCCATAGTGGGTGGTTCCAAGGTCTCGTCC
AAGATTGGAGTTATTGAATCGCTTCTTGAGAAGTGTGACATCCTTCTTCTTGGTGGTGGAATGATCTTTACATTCTACAAGGCGCA
GGGTCTCTCTGTTGGCTCGTCACTTGTGGAAGAAGACAAACTCGAACTGGCTACATCTCTCCTTGCCAAAGCTAAGGCCAAAGGCG
TCTCTCTTTTGTTGCCAACCGATGTTGTGGTTGCTGACAAGTTCGCTGCTGATGCCAACAGCAAGGTTGTGTCTGCATCAGGCATT
GAGGACGGATGGATGGGGTTGGACATCGGTCCAGAGTCGATAAAAACATTCAAGGAAGCTCTGGACACAACACAGACAGTCATTTG
GAATGGACCTATGGGAGTTTTCGAGATGGAGAAGTTTGCTGCAGGAACAGAGGCGGTTGCGAATAAACTAGCAGAGCTAAGTGAAA
AAGGAGTGACGACTATAATAGGAGGAGGAGACTCAGTGGCTGCAGTGGAGAAAGTAGGAGTTGCAGGTGTCATGAGTCACATCTCC
ACTGGTGGTGGAGCCAGCTTGGAGCTTTTGGAAGGCAAAGTACTTCCCGGTGTCATCGCCCTTGATGAAGCTTAATAGACACTCTA
AAACATTTTTATGAGGCACAACTATGTATTACCATTGAGTTTCTTTTGCTGCAAATCTATGAGTATTCAATACTTTTCTGACTTTA
TATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884926 hypothetical protein ARALYDRAFT_478641 [Arabidopsis lyrata subsp. lyrata] | 2131 | 4e-237 |
| NP_187884 phosphoglycerate kinase 1 [Arabidopsis thaliana] | 2124 | 2e-236 |
| XP_002891879 hypothetical protein ARALYDRAFT_474689 [Arabidopsis lyrata subsp. lyrata] | 2010 | 4e-223 |
| NP_176015 phosphoglycerate kinase [Arabidopsis thaliana] | 1997 | 1e-221 |
| XP_002513353 phosphoglycerate kinase, putative [Ricinus communis] | 1955 | 9e-217 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P50318 Phosphoglycerate kinase, chloroplastic | 2027 | 2e-226 |
| P29409 Phosphoglycerate kinase, chloroplastic (Fragment) | 1869 | 4e-208 |
| Q42961 Phosphoglycerate kinase, chloroplastic | 1868 | 5e-208 |
| P12782 Phosphoglycerate kinase, chloroplastic | 1852 | 3e-206 |
| P12783 Phosphoglycerate kinase, cytosolic | 1705 | 4e-189 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LD57 Phosphoglycerate kinase | 2124 | 2e-236 |
| Q9C7J4 Phosphoglycerate kinase | 1997 | 9e-222 |
| B9RHY4 Phosphoglycerate kinase | 1955 | 6e-217 |
| A9PIR4 Phosphoglycerate kinase | 1931 | 4e-214 |
| B9HI53 Phosphoglycerate kinase | 1928 | 9e-214 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12780.1 PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase | 2124 | 9e-239 |
| AT1G56190.1 phosphoglycerate kinase, putative | 2023 | 4e-227 |
| AT1G56190.2 phosphoglycerate kinase, putative | 1872 | 1e-209 |
| AT1G79550.1 PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | 1693 | 8e-189 |
| AT1G79550.2 PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | 1693 | 8e-189 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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