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Information for unigene UN22957

FASTA Sequence
Unigene ID: UN22957Length: 1053 SSR 
ATACCCGAATGGCCTTTAATTGACCCAACATCTCTGTGCTACGTCATTTATCATGAAGAAGGCAACTAATTGGAAAATAAATACAC
AAATGAGTCATTTTCTGAATCCATATTAAAGATTGCACATAATGCTTTGAGAAAAATGTCCTGGGAGAGAGCTAATAGCTTAATTT
CGTTTGGCAGATCAAAAAATACCCATCCCGAAGTCAGTTTTTGGTGTTTTCAATCTTGTCTTGGAGGGGATGTGGCCGTTGATGTA
CCTTTGGGTTGGCTTTCTTCGGTAGATGTTTGTAGCTTTTCTTGATCGCCTGCTTCACCTGGAGACAAAGCTTTGAGCTGCTCTTC
TGTAATCTTGAGGTAATCCTCGGTTGTGTAAGCTTTTGGTGATTGAACATCATTCCGGTCACTTGAAGCAGTCACGGGATCTTCAG
TGCTAGGAACTGATGTTGGTGGTGGTGGTGGAGTGTTCATTCTGTTCTGGTTGTACACATTTGGAGTTGAGATTTCATCAAGGCCA
ATCTCACGCTCAAGGGTGCTTTTGAAATCTCTTGAAACATCCTGTAGCTCTCTAATAGTGGGCTGAAATGTACGCAGTGTTTTCCC
AAGAGTTCGAGCAACCTCTGCAAGGCCTTTAGGACCAAAGACGAGCAAAGCAACAACTCCAATTACCAAAGCCTCAGGTGCTCCAA
CGCCAAACAGAGACGCACGAATCACCATACCTTTACTACATCTTCTCTTTCTCTCTGGGTTTGAAGATTTCGGCGAGATTGAGATG
CCCATATGCTTTAGACCAATGTAAGGAGAGAAACGAGAAGAAGAACCCAACCATGAAGAGAGATAAGGTTTCGAAGTTTTGTAAGA
AGCGAGAAGGTGAGACCTATTTGTAATCGTTGGTGAAGAAGATGCTATAATCTGAGAGGCCATGGCCATGGGCAGCTTCGAAATTT
TTATAACAGTTTTTTTGTCTGTGTTAGCTTCGAAGAATCGTTAAGACATAACTCACTCCCTCACCTTCAACAGGTTCAATCCATGT
CCATTAGCTTGGAAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200057 Bacterial sec-independent translocation protein mttA/Hcf106 [Arabidopsis thaliana]8623e-090
XP_002864174 HCF106 [Arabidopsis lyrata subsp. lyrata]8283e-086
XP_002513673 conserved hypothetical protein [Ricinus communis]5343e-052
XP_002318805 predicted protein [Populus trichocarpa]5139e-050
ABK94883 unknown [Populus trichocarpa]5111e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q31RR1 Sec-independent protein translocase protein tatA/E homolog1577e-010
Q5N2J3 Sec-independent protein translocase protein tatA/E homolog1577e-010
Q8DJ44 Sec-independent protein translocase protein tatA/E homolog1577e-010
Q110N2 Sec-independent protein translocase protein tatA/E homolog1326e-007
A3PB74 Sec-independent protein translocase protein tatA/E homolog1282e-006

TrEMBL top hits (Blast detail)Scoree value
Q9XH75 HCF1068622e-090
B9RIV4 Putative uncharacterized protein5342e-052
B9I469 Predicted protein5136e-050
A9PET0 Putative uncharacterized protein5111e-049
B9IDB3 Predicted protein5111e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G52440.1 HCF106; proton motive force dependent protein transmembrane transporter8639e-093
AT5G28750.1 thylakoid assembly protein, putative1272e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
116  60%
 
122  20%
 
101  10%
 
91  10%

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