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Information for unigene UN22958

FASTA Sequence
Unigene ID: UN22958Length: 1213  SNP
GAGCCCAGGAAAGTCTCGAAAACAAAATCGAGTGGGAGTAAAGTGCACAGCAAATAAATAGAAACAGAACTCAAAAGGATCTTTAG
TGTTTCATCATGTCAACAAGACAGACGGATCTTTTTCGACCTTTTTATTCTCTACAAATCCGACAAGAAAAAGGGGAGAAAGTTTT
AAGCAGTAGCCATTAAAACCCAACAAACCAAGCAGAGGAAATAGAACCCAAGTCTAAAGAAAAAAACTATTTTAAATGCTTTGATT
TGTTTGGCTCATCAGTTTCAAGGCTTGAGAGAGAGAGCCAAACCAACCTTAGCATTCTTGTCAATAGCTTTGGTGTCAACTTCTCC
AGAGATAGTGAAGAAGGACCCAGGTGTCCACTGGTGTTGAATGAGAGCATTGGCTATCCCAGCACTGTTCACACGTGCCTTGACCA
TGGTCAAGGGGTCGAGTGAATGCTGCGTTCCCACTGTTATGGTGTTGGCCTTGCTAGAGAACTTGTGGCTCACTTCGGCTCCAACA
GCAGTGTTGAACAGCGGATTAACAATATGGTAGTACGAAGCGTTGACAGAATCTCCTTTGTCATTCACGGTAAGGGAGGCAATTAA
ATCATCCTTAGTGAAATTTAAACCAGCATTGATCTTGGTAAAATTGCCGGATTTGGTGTCGAAGGAAACATCAGTACCAGCAGCTA
AGAGATTGGTTCCAATAACACCAGAGAAGTTGACAGTGGGGTTCTGAGTCAAGCCCATGCTGGTGCTGATACCAGCGTAGTCATGC
AAGTACTGAAGCTCAATCTTGCCGGAATTTTGGTCAGGGGCCCTGAAGCTGAAGATAGACTTGAGTCCAGGTGCAGCCTCATCAAC
GGTAGCAGTGATCAAAACGGTATTGTCAGTGGAAACTCTCAAATCAGTAGTGATGTTCTTTTGCTTCAAAAGAAAAGCGACATCTC
CCAAAAGGAGGTCACCTTTCTTAGTTCCAGTTGAAGTGATGGCAACACCGGCTGGAGAGATAGTGGTGATACTCAATTTGTGGTCG
CTGTTGTGGTCCTTGTACAGCAGATCTCTGACTTTTTTGCCGATGTCAGTGTAGAGACCTGGACCTTTCACCATTTTTGCTTTGCT
TCCTACTTCAAAGAACAAAAGATACCGAGAGAGAGAGTGAGAGAAACGCAGAATGGTAGTCGTGGCTGGCGTCTATAATAGGAAGC
AGAGGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884286 hypothetical protein ARALYDRAFT_477400 [Arabidopsis lyrata subsp. lyrata]12683e-137
AAW22621 outer mitochondrial membrane protein porin 1 [Brassica napus]12657e-137
NP_186777 mitochondrial outer membrane protein porin 1 [Arabidopsis thaliana]12362e-133
AAM65525 putative porin [Arabidopsis thaliana]12352e-133
AAQ87020 VDAC1.2 [Lotus japonicus]10757e-115

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRH5 Mitochondrial outer membrane protein porin 112367e-135
P42055 Mitochondrial outer membrane protein porin of 34 kDa10297e-111
P42056 Mitochondrial outer membrane protein porin of 36 kDa10082e-108
P42054 Outer plastidial membrane protein porin9912e-106
Q9SMX3 Mitochondrial outer membrane protein porin 29777e-105

TrEMBL top hits (Blast detail)Scoree value
Q5MD15 Outer mitochondrial membrane protein porin 112655e-137
Q8LA84 Putative porin12351e-133
Q6W2J4 VDAC1.210755e-115
Q4PKP6 Mitochrondrial voltage-dependent anion-selective channel10622e-113
A5BE54 Putative uncharacterized protein10576e-113

Arabidopsis top hits (Blast detail)Scoree value
AT3G01280.1 VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel12375e-136
AT5G15090.1 VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel9785e-106
AT5G67500.1 VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel6811e-071
AT5G57490.1 VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel6059e-063
AT3G49920.1 VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5); voltage-gated anion channel3039e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1111  34%
 
104  13%
 
129  28%
 
95  16%
 
193  9%

Unigene MembersMember information