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Information for unigene UN22980

FASTA Sequence
Unigene ID: UN22980Length: 1166  SNP
TATATTTAATAAGTAAACCTTTAATTTTTTTTTTATCTCTTACCACTATTACAAACTAAAAAAACTCCCTATATAAACTCAATTCC
CCCACACTTGATTGGATATCAGTCTCACAATTCTTATCAAATCATTTCTGATTGTCATAACCGACTAACCAACCCCTCCAAATAAA
ACAAAATGTATATTACATCAACTTCCAGATATTCTATAATTTCAATATTATCCATATTCAGCTTATTGTTCTCTCTCCAAGGAACT
CATGGGGACGACGGAGGTTGGCAAGGTGGCCATGCCACGTTCTACGGTGGCGGTGACGCTTCCGGCACCATGGGTGGAGCTTGTGG
CTATGGAAATCTGTATAGCCAAGGTTACGGGACGAACACAGCGGCTTTAAGTACGGCACTGTTCAACAACGGACTCACGTGCGGCG
CGTGCTACGAGATGAAGTGCAACGATGACCCGAGATGGTGTGTCGGTTCCACTATCACCGTCACGGCTACAAACTTTTGTCCACCG
AACTTTGGCCTCTCGAACGATAACGGAGGATGGTGCAACCCTCCTCTTCAACACTTCGACCTAGCCGAGCCAGCTTTTCTCCAAAT
CGCTCAGTACCGTGCCGGCATTGTCCCTGTCTCTTTCCGAAGAGTACCGTGTATGAAGAAAGGAGGGATAAGGTTTACAATCAACG
GACACTCTTACTTCAACCTTGTTCTGATTTCCAACGTAGGAGGAGCAGGAGACGTTCACGCTGTCTCGATCAGAGGCTCAAAATCA
GGGTCGTGGCAAGCAATGTCTAGGAACTGGGGGCAAAACTGGCAGAGCAATTCTTACCTCAACGACCAGAGCCTCTCGTTCCAGGT
CACAACCAGCGATGGTCGCACCGTCGTCAGCAATGACGTGGCTCCTTCTAATTGGCAGTTCGGACAAACCTTCCAAGGTGGTCAGT
TCTGAGTCCTCTCTCATGTGTTTGGTGTGCCGATGTGGCTGCGTATTGCTGAGGTGGCTCATCAGCACCCGCTTGGCTTTCAAATG
GTTGTATTTATCGTGCCTACGAAGAGCAAGTTTTTATTTTGTTTTACATGTTTATTGAACTTATTAGCCTTTTGGCATACTCAAAA
ATGTGCTAGTCAAATACATATTGCTTAAAGAAAGTCTTTTAAGGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881731 ATEXPA8 [Arabidopsis lyrata subsp. lyrata]13231e-143
NP_181593 expansin A8 [Arabidopsis thaliana]12819e-139
ABY65114 putative expansin [Gerbera hybrid cultivar]11501e-123
ACJ70084 expansin [Diospyros kaki]11492e-123
ACK43222 expansin 2 [Ziziphus jujuba]11492e-123

Swiss-Prot top hits (Blast detail)Scoree value
O22874 Expansin-A812814e-140
Q38866 Expansin-A210583e-114
Q9LDR9 Expansin-A1010101e-108
A2Y5R6 Expansin-A410082e-108
Q0DHB7 Expansin-A410082e-108

TrEMBL top hits (Blast detail)Scoree value
Q0WQK9 Expansin12816e-139
B6CJW6 Putative expansin11509e-124
B7U8J1 Expansin 2 (Fragment)11491e-123
B7U8J4 Expansin11491e-123
Q2Q500 Alpha-expansin 211463e-123

Arabidopsis top hits (Blast detail)Scoree value
AT2G40610.1 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)12823e-141
AT5G05290.1 ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)10592e-115
AT1G26770.1 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall10109e-110
AT1G26770.2 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall10109e-110
AT2G03090.1 ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)10001e-108

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
69  50%
 
104  22%
 
113  17%
 
92  11%

Unigene MembersMember information