Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22984

FASTA Sequence
Unigene ID: UN22984Length: 817  SNP
GGATACCCGACGCAGCTTCGTTTCCACAACTCTCTGTTAGTTCGATTGTTGATCTACTTCAAATGGCGTCGGAGAAGAAGCTGTCG
AACCCCATGAGGGACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGTGATCGTCTCACTCGTGCCTCCAA
GGTTTTGGAACAGCTCAGTGGACAAACCCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGCGTAACGAAA
AGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATGCAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTC
AGGAGGAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTGATCTTGGTATCAAGTATGATCCTTCTACGGG
TATCTACGGAATGGACTTCTATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTGCAAGGCTCGTGTTGGTA
TCCAACACAGAGTGACTAAGGATGATGCAATGAAATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAACATC
ACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCTAGCTTTTGTTTTTTTTAAGTTGTCATCTTTACGATTTCT
GGATGTTTAAGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGGGGTAGAAATTATATTTCCAGAACCTTCTTTTATGT
TTACCATCTATGTCATTTAAATTTCCAAGAACCTTCTTAATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850376 60S ribosomal protein L11-1 [Arabidopsis thaliana]9312e-098
CAA57395 ribosomal protein L16 [Arabidopsis thaliana]9284e-098
NP_191429 60S ribosomal protein L11-2 [Arabidopsis thaliana]9276e-098
XP_002876475 60S ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata]9276e-098
XP_002880003 60S ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata]9267e-098

Swiss-Prot top hits (Blast detail)Scoree value
P42795 60S ribosomal protein L11-19319e-100
P42794 60S ribosomal protein L11-29273e-099
P46287 60S ribosomal protein L119013e-096
A2YDY2 60S ribosomal protein L118744e-093
Q0DK10 60S ribosomal protein L118744e-093

TrEMBL top hits (Blast detail)Scoree value
Q0WQZ1 60S ribosomal protein L11B9311e-098
B9R7U8 60S ribosomal protein L11, putative9078e-096
Q8GTE2 Ribosomal protein RL59051e-095
Q676Z7 60S ribosomal protein L11 (Fragment)8989e-095
A9PBE6 Predicted protein8971e-094

Arabidopsis top hits (Blast detail)Scoree value
AT2G42740.1 RPL16A; structural constituent of ribosome9326e-101
AT3G58700.1 60S ribosomal protein L11 (RPL11B)9282e-100
AT4G18730.1 RPL16B; structural constituent of ribosome9282e-100
AT5G45775.2 60S ribosomal protein L11 (RPL11D)9282e-100
AT5G45775.1 60S ribosomal protein L11 (RPL11D)8799e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
97  27%
 
77  27%
 
117  27%
 
103  12%
 
82  8%

Unigene MembersMember information