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Information for unigene UN22993
| FASTA Sequence |
| Unigene ID: UN22993 | Length: 1168 |
| SNP | GGTTGAGAGGGTGACAAACAACAAGCAAAAATAAGCAGGGACATTATAGAAGAAGAAGAAAAAGAATAAGGGAGAGATGACGGTCA
TAAATATTATCTTCAGAGTCGATGAGATATGCAAGAAGTACGACAAGTACGACGTCGACAAGCAGCGTGAGCTCGGCGCTTCCGGA
GACGATGCCTTCTCCCGTCTCTTCAACTCCATTGATACCGATATTGAATCGGTTGTACATAAAGCGGAGTTGGCATCAACAGAGAG
CAACAGAGCTGCAGCTGTGGCCTTGAATGCTGAGGTTCGAAGGACAAAAGCTCGTTTAGCTGAAGATGTTGTTAAACTGCAGAAAC
TCGCCGTTAAAAAGGTCAAAGGGCTCACAAAAGAGGAACGAGAGTCCCGATGTGATCTAGTTATCGCGCTAGCCGATAGGATTCAA
GTGATACCTGACGGACATGAAAGACAATCTAATAATGAATGGGGAGGTGCTTCTGCCCCTAACAAGAACATCAAGTTTGATATATC
TGAGGAAGACATGGATGACGGGTTTTTCCAGCAAACTGAAGAATCCAGCCAGTTTCGACAAGAATATGAAATGAGAAAAAAGAAGC
AGGACGAGGGCCTTGATGTTATATCAGAAGGTTTGGATGCACTGAAGAACTTAGCACGTGACATGAACGAGGAACTTGACAAGCAA
GTCCCATTGATGGATGAAATGGAAACAAAGGTTGATGGAGCAACTTCGGATTTGAAGAACACCAATGTTCGGCTCAAGCAACAGCT
TGTAAAGATGAGATCGAGCCGCAACTTCTGCATCGACATTATTCTTCTCTGTGTGGTCCTTGGAATCATTTCTTACATCTATAATG
CCCTGAGCTAAAGTTGGAGAGGGCAGCTACCGGATATTCTCATTGCCATTGTCAAGCCTATGGTAACTTCTTACCAAAGTAATAAT
AGTCATTTCCTGGAGAGCAAGCAAACAAGTTATTTTCACAAGCTTTTACCATTTGTATACAGTTTTAAGGAATTATTCTTGGCAAG
AAATAATACATATGCACAAGGTTCGCTGTTGTAGTTGTGTTTGTTTTGTTGGGCGATTTATTTTGTTGAATCAGAATGTTTTAGCG
TTTCCAAGTATCATAAATTTGTAAGAAAATGAAAGTAAACGTTTGTGGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877397 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1202 | 1e-129 |
| NP_566878 syntaxin-72 [Arabidopsis thaliana] | 1201 | 2e-129 |
| ABK28587 unknown [Arabidopsis thaliana] | 1201 | 2e-129 |
| T47468 hypothetical protein F18N11.40 - Arabidopsis thaliana | 1186 | 9e-128 |
| XP_002526376 Syntaxin-72, putative [Ricinus communis] | 920 | 7e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MF08 Putative uncharacterized protein (Fragment) | 1201 | 1e-129 |
| Q1PEI2 Syntaxin 72 | 1201 | 1e-129 |
| B9SK57 Syntaxin-72, putative | 920 | 4e-097 |
| C0L7E7 Syntaxin-71 | 883 | 9e-093 |
| Q2HIU8 At3g09740 | 879 | 3e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G45280.1 SYP72 (SYNTAXIN OF PLANTS 72); protein transporter | 1202 | 5e-132 |
| AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | 880 | 1e-094 |
| AT3G61450.1 SYP73 (SYNTAXIN OF PLANTS 73); protein transporter | 753 | 6e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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