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Information for unigene UN23006
| FASTA Sequence |
| Unigene ID: UN23006 | Length: 1416 |
SSR | | ATGGTTTATAATCAGTTTCTTGTGTATTGAATGTAATAACAGGATAAAACTTAAAATTCATAATCAGTTTTGTTCACATACACTCT
CTCTTGCATAGAACATATATACGTTTATATGTAAAGGACACCAAAAAACAAAAACTCTTATAATTTTCATAGCTCGAAACGTACAA
CAGTTTTGATTCCGATGGTGACCACATAGTTTACTACGTACTATCATCAATCACTGGTGGTAAGTGCCATTCTTTCTTTCTGAGCT
TCTGATGGCAGCTTAACATCGGTTGCTAATCCAATGGCTTGGAGGAATCTAACGACGTACCAAGTCATATCAAATTGCCACCATTC
AAGTCCATGTCGAGCAGAGAACTCGAAAGCATGGTGATTGTTGTGCCATCCTTCTCCAAATGCTAGAGCTGCTACCCACCAGTTGT
TCTTAGACAAATCTCCAGTGTTCCAAGCTTGGTTTCCCCAAACGTGACAAGCCGAGTTTACAAGCCACGTTATGTGATATACCCAT
ACTATTCTTACACCCATTCCCCAAACGATGAAGGGGAAGCCACCCGTTGCGTAAAGAGCCACCGCCAGAGCAACCGGATGCCAAAT
GTAGGTGTTTTTAAGGAACTGATAGAAGGGCTGCTTCTCCAAGTCCCCAACATTATTAGGCTCTCCAACCCTTTGCGTGATAGTAT
TGGTATCAAACATCCAATTCATGTGACTAAACCAAAACCCTTCAAGCGGGCTATGAGGATCCTTGTCTGAATCACAAAACTGATGA
TGGTACCTATGCGTACTCACCCAATCAATAGGGTGCCCCTGAAGAGCCTGAGCTCCACAATAAGCAAACAAGTACTCAAGCCACTT
AGGAAGCTTGAAGCTTCTATGAGTAAGATTCCTATGAAAAGACAGAGTGATCCCCAGAAGACCCGTCACAATATAAAGCGCAAAAG
CAACCGAGACAGCTCTCCAGTTAAACTGAAACGGAGCCAACAAGCTAAGCAAATGCATGGAGACAACAACAGCAACAGCGCCGAAA
TCCATCGAAGTCCACTCTCTCTCCCACCAAACCGCTTTGTCCTTCTTCTTCTTCACCATCACATCCGAAAGCATTATCCTTGTGTA
ATCTGAAGCTGCTGCGGCGGCGACATCTCTCTTAGGACCCTTGAATGCGGAGGAGACGAGGAGGCTCGGGAGGGTGAAAGGAGCGA
GCTTTTGGTTGTGGGTGAGTGAGATTCCGGAGAGATTCAACGAGGGCGGTGAGGTTAGAGGTCGTGGAGGCGAGGAGAGGAAGAAA
GGTTTGGGCTTTGTTAAGGGAGAGGTCAGAAGAGACGCCATTGTTGTCGCCGAGAAGGAGAAGGAGAGAGTTAAACCCTACAACAT
ATACATATATAGTATCAATATATATATATATATGTGTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33684 unnamed protein product [Thellungiella halophila] | 1734 | 3e-191 |
| XP_002882967 hypothetical protein ARALYDRAFT_479040 [Arabidopsis lyrata subsp. lyrata] | 1704 | 1e-187 |
| NP_566529 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase [Arabidopsis thaliana] | 1696 | 9e-187 |
| AAK92773 putative delta 9 desaturase [Arabidopsis thaliana] | 1692 | 3e-186 |
| AAM63459 putative delta 9 desaturase [Arabidopsis thaliana] | 1687 | 1e-185 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic | 1696 | 4e-188 |
| Q9LVZ3 Probable lipid desaturase ADS3.2, chloroplastic | 997 | 4e-107 |
| O65797 Delta-9 acyl-lipid desaturase 1 | 984 | 1e-105 |
| Q9SID2 Delta-9 acyl-lipid desaturase 2 | 956 | 2e-102 |
| Q9FPD5 Delta-9 desaturase-like 3 protein | 946 | 3e-101 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D3YLK2 Delta-9 fatty acid desaturase | 1338 | 2e-145 |
| B9RV72 Delta 9 desaturase, putative | 1321 | 2e-143 |
| A9NXX9 Putative uncharacterized protein | 1223 | 4e-132 |
| Q8S4Q3 Desaturase delta 9 | 1222 | 6e-132 |
| B9I0S1 Predicted protein | 1211 | 1e-130 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G15850.1 FAD5 (FATTY ACID DESATURASE 5); 16:0 monogalactosyldiacylglycerol desaturase/ oxidoreductase | 1696 | 3e-189 |
| AT3G15870.1 oxidoreductase | 997 | 4e-108 |
| AT1G06080.1 ADS1 (DELTA 9 DESATURASE 1); oxidoreductase | 984 | 1e-106 |
| AT2G31360.1 ADS2 (16:0Delta9 Arabidopsis desaturase 2); oxidoreductase | 956 | 2e-103 |
| AT1G06120.1 fatty acid desaturase family protein | 946 | 3e-102 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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