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Information for unigene UN23017

FASTA Sequence
Unigene ID: UN23017Length: 2696  SNP
CTTTGTATCTAGTCTCTATTCATTTGACGGAGCCACACTTCGTGTGGCGGCGATTCCGTGTTATTCCTTTATCTCCCTATCTTCCA
CGCTTTAGCTTCTGCATAGTCTCTGAGTTTATCTCCGACCTTTTTTTTCTGATCTTTCAGTCCGATACGAACGAGGAGCAAGCAAT
CCTAGACGATGACGATCACTTCTAACATCTCTGTCCAAAACGACAACCTTGTTGTGCAAGGGAAGACTATCCTCACCAAAATCCCC
GACAACGTTATCCTCACTCCGGTCACCGGCGCCGGATCAGATTCCGGCGCTTTTATAGGCGCAACTTTTGAACAGAGCAAGAGTCT
CCATGTCTTCCCCATCGGTGTGTTGGAGGGTCTTCGGTTTATGTGCTGTTTCCGGTTTAAACTATGGTGGATGACTCAGAGAATGG
GAACCTGTGGCAAAGATATTCCTTTGGAGACACAGTTCATGTTGCTAGAGAGCAAAGATGAGGTTAACGGAGACGACGATGCTCCT
ACTGTTTATACCGTCTTCCTCCCTCTCCTTGAAGGCCAGTTCAGAGCTGTTCTTCAAGGAAACGAGAAGAACGAGATTGAGATTTG
CCTCGAGAGTGGTGATAAGGCGGTGGAAACTAGCCAAGGAACACATCTTGTCTATGTTCATGCTGGGACCAATCCTTTTGAAGTTA
TCACCCAATCCGTGAAGGCTGCAGAGAGACACATGCAGACATTTCACCATCGCGAGAAGAAGAAGATGCCTTCTTTCCTAGACTGG
TTTGGCTGGTGTACATGGGACGCGTTCTACACAGACGTGACTGCGGAGGGCGTCGATGAGGGCCTTAGAAGTCTTTCAGAGGGAGG
TACTCCTCCCAGGTTTCTGATCATAGATGATGGTTGGCAACAGATAGAAAACAAAGAGAAAGATTCAAACTGCGTTGTCCAGGAAG
GAGCACAGTTTGCTACTAGACTTGTTGGTATCAAGGAGAACGCAAAGTTTCGGAAGAATGATCCAAAGGACACACAAGTATCAGGG
CTTAAGAGTCTCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGG
GGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAAC
CAGACATAGTCATGGACAGCCTCGCCGTTCACGGTCTCGGTCTTGTCAACCCTAAGAAAGTGTTCAACTTCTACAACGAGCTGCAT
TCATACCTGGCTTCGTGTGGTATAGACGGAGTCAAAGTTGATGTCCAGAACATCATCGAAACCCTCGGTGCCGGTCTTGGCGGGAG
AGTCGCTCTGACACGCAGCTACCACCAAGCGTTAGAAGCTTCCATCGCTAGGAACTTTAAAGACAATGGGTGCATTTCTTGCATGT
GTCACAACACGGATGGGTTGTACAGCGCGAAACAGACTGCTATTGTTAGAGCGTCTGATGATTACTATCCTAGAGATCCTGCTTCT
CACACTATTCACATAGCATCAGTTGCGTATAATACTCTTTTCCTTGGAGAGTTCATGCAACCTGACTGGGACATGTTCCATAGTTT
ACACCCAACTGCAGAGTACCATGCTGCAGCACGTGCGGTAGGTGGATGTGCAATCTATGTCAGTGACAAGCCGGGCAACCACAACT
TTGATCTATTGAGGAAGCTGGTTCTTCCTGACGGTTCGGTTCTTCGTGCTAAGCTTCCGGGTAGGCCAACACGTGACTGCCTATTT
GCTGATCCAGCTAGAGATGGAACCAGCTTGCTGAAGATCTGGAATATGAATAAGTTTACTGGTATAGTTGGTGTATTCAACTGTCA
AGGTGCTGGTTGGTGCAAGGATACCAAGAAGAACAGGATTCATGATACTTCTCCTGGTACTCTCACGGGTTTGGTCCGTGCGGAGG
ATGCTGATCTCATCTCCGAAGTGGCTGGTCCAGATTGGAGTGGAGATTCAATAGTCTACGCTTATAAATCAGGAGAGCTGGTTAGA
CTACCAAAGGGTGCCTCAATCCCACTCACTCTCGAAGTCCTTGAATATGAACTCTTCCACATCTCTCCTTTGAAGGAAATCACTGC
AAGCATCTCGTTCGCACCTATTGGACTCCTGGACATGTTTAACTCAAGTGGGGCTATTCAGTCCATGGATATCACTACCGTGACAG
ACGAGAAACCTGAGGTTTATTCCTCTTCAGTGGTCAGCGAGAACCGTTCTCCAGCAGCGCTGATATCTCTAGGTGTTAGAGGTTGT
GGTCGTTTTGGAGCTTACTCTTCTCAGCGTCCGCTGAGATGCGCCGTTGATAGCACCGAGACTGAGTTCAACTACGATGCAGAGGT
TGGGCTTGTGACGTTGAACCTACCTGCGACAAAGGAAGAAATGTTCAGATGGCATGTTGAGATTCTGGTGTAAACAAAGAGAAGCT
TGGTGTACTAAGCTGGATCGGGTTTTATGATTCTTTTTACTACCATTTTGCCATTGTATTGTTTGTTATAGACGTTTTGTAGTAGT
ACTAGTAGACTAGTAGTATCTTCGCTTGTAATAAAATGTAATCTCGTTCTGTCTCTGTAGTTCTTTTGTTTCAAGATAAAATGGTC
ACAAATAAGTAATTCTAGAATGCATTCATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA55893 putative imbibition protein [Brassica oleracea]38970.0
BAJ33914 unnamed protein product [Thellungiella halophila]37930.0
XP_002878159 ATSIP2 [Arabidopsis lyrata subsp. lyrata]37590.0
NP_191311 putative galactinol--sucrose galactosyltransferase 2 [Arabidopsis thaliana]37580.0
AAK92707 putative imbibition protein homolog [Arabidopsis thaliana]37540.0

Swiss-Prot top hits (Blast detail)Scoree value
Q94A08 Probable galactinol--sucrose galactosyltransferase 237580.0
Q84VX0 Probable galactinol--sucrose galactosyltransferase 123519e-264
Q8RX87 Probable galactinol--sucrose galactosyltransferase 621725e-243
Q9FND9 Probable galactinol--sucrose galactosyltransferase 514191e-155
Q5VQG4 Galactinol--sucrose galactosyltransferase13832e-151

TrEMBL top hits (Blast detail)Scoree value
Q43408 Putative imbibition protein38970.0
B9UD35 Seed imbibition protein 132280.0
B9II69 Predicted protein32270.0
B5UAS6 Alkaline alpha galactosidase32060.0
Q27J84 Alkaline alpha galactosidase31840.0

Arabidopsis top hits (Blast detail)Scoree value
AT3G57520.1 AtSIP2 (Arabidopsis thaliana seed imbibition 2); hydrolase, hydrolyzing O-glycosyl compounds37590.0
AT3G57520.2 AtSIP2 (Arabidopsis thaliana seed imbibition 2); hydrolase, hydrolyzing O-glycosyl compounds33120.0
AT3G57520.3 AtSIP2 (Arabidopsis thaliana seed imbibition 2); hydrolase, hydrolyzing O-glycosyl compounds28020.0
AT1G55740.1 AtSIP1 (Arabidopsis thaliana seed imbibition 1); hydrolase, hydrolyzing O-glycosyl compounds23518e-265
AT5G20250.1 DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds21724e-244

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
2111  39%
 
105  18%
 
122  7%
 
66  21%
 
94  14%

Unigene MembersMember information