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Information for unigene UN23020
| FASTA Sequence |
| Unigene ID: UN23020 | Length: 1606 |
| SNP | AAAAACATGAAGTACCCGTAATGATAAAATAGAAGACTTGTATCTGACAGTCTTGAGATTTTCACAATATGAAAATAAACCTCCGA
AACAACGCGCAATTCCAGAACTATTAAGTATTACTTAAGACCACAACCTCTTGTCCTTAAACCACTGTATTAAACATAAGCGACTC
ATAGTATATCAAAACCAAAAACTAATTGTCAAACCAAACCAATTATCTTTTCACTTGAAGCACTTGGCGTCCAAGAAAGCTTCACC
TTCAAATGGCTCTGCGTCTTCGATCATCTGGCTAACACGCTCCTTCTGTGCTTCATCCGAGATGTCAACCTTTGTCCATTCGTACA
GCTCCATGTCGTACACCTCGTCCATTATGAACTTTGGGATCTCTGGCCCTCTGAACAACCACAAACCCTTCACCTTGAACGGAGCC
TCTGACCCGCAGATCAGCATCTTTCCAAAGGCGTACTTACGAGCCAAGTCCATTCTCTGAAGGAACCCGCCTACCTTGTTGAGCGT
CACAAAGGACACCATGTTCTCGTCGTTGTACTTGTAGTCACAGAACCATAGTGAGTATCCCTCTGGGTCATACATGTCCCAGAATC
CTTTAATAGCAACCTCACGGAAGTTAGATTTGGTGTTCGAGTAAAGCCTCTTCCACTCATCCAGAACCATTGGGCTTGGTGGTAGC
AAATCAAGAGGGTTCTTTGCTTTGGGCTTTGGTGCCTCTTCTTCCTCTTCAACAACCTTAGGTGCCTCTGGTGCAGGGGCAGCCTT
TTTCTTAGGCTCCTCTTTGGGCTTTGCAGACTGGGCAGCTTTCTTGGAAGCGACAGGAGGGACAGCTTCAGTCTGTTTGACATCAC
CCACAACTTTCTTGAAGTTCGGTTGGTTGATCACGGTCCAGAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTC
ATGACAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGGGTAACAGAGTGTCCAACTAGGTAAGTGTTGGA
AGTGAGATGAGTGTTCAGGGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTGCACTGTATGCCATAAAGC
CCATTCTTGGGCCGAACCACTTCAAGATGTTACCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTATTCG
ATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTACATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTC
GGGAGTCTCAAGTACAGGAACCTTTCCCAAAGGATTCATCTTGAGGAACTCTGGGGTCTTGTTGGTGACACCCATCTGAAAGTCAG
AGGGCACATCGATCTTCACACCAACGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTTCCCTTGTATGTGTGCAACACC
AAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTGGATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGA
GGCGGAGAGAGCTATAGAATTAGGGTTTTTATATTCGTAGTGTATTCCCCTCTCCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889762 hypothetical protein ARALYDRAFT_471063 [Arabidopsis lyrata subsp. lyrata] | 2037 | 3e-226 |
| NP_563848 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 2015 | 1e-223 |
| XP_002892012 hypothetical protein ARALYDRAFT_474857 [Arabidopsis lyrata subsp. lyrata] | 1955 | 1e-216 |
| NP_176084 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 1947 | 8e-216 |
| AAK59587 putative elongation factor 1B gamma [Arabidopsis thaliana] | 1947 | 8e-216 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04487 Probable elongation factor 1-gamma 1 | 2015 | 5e-225 |
| Q9FVT2 Probable elongation factor 1-gamma 2 | 1947 | 3e-217 |
| Q9ZRI7 Elongation factor 1-gamma 1 | 1736 | 1e-192 |
| Q6YW46 Elongation factor 1-gamma 2 | 1730 | 5e-192 |
| Q9FUM1 Elongation factor 1-gamma | 1691 | 2e-187 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHI9 AT1G09640 protein | 2015 | 7e-224 |
| B7SDI2 Elongation factor 1-gamma | 1737 | 1e-191 |
| Q0E2Q6 Os02g0220600 protein | 1736 | 2e-191 |
| B8AE83 Putative uncharacterized protein | 1734 | 3e-191 |
| Q0E2Q7 Os02g0220500 protein | 1734 | 3e-191 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09640.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 2016 | 3e-226 |
| AT1G57720.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1948 | 2e-218 |
| AT1G57720.2 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1948 | 2e-218 |
| AT2G30870.1 GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10); copper ion binding / glutathione binding / glutathione transferase | 168 | 6e-012 |
| AT2G30860.1 ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase | 147 | 2e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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