 |
Information for unigene UN23024
| FASTA Sequence |
| Unigene ID: UN23024 | Length: 1893 |
SSR | | ATCCACCAATATCTATTATTTTATTGAGTTTGGAGACATATTCAACGATTAATAATCTCCATAAACATGGTCGCTTATTATTAATG
ATGATTCTCGGTCTGTAATCAAATTTTACCCAAGGATAAGACAGGACACACACGACTTGAGTCCGTTGCTCAAAAACTTGTCATTA
CCGACAAAAGACACAAAACACATGACGAAGTGGAGAAAGAGAAGATAAAAACCATTGGTTTATCAGTCGCTGGTACTGAGGACACA
ACGAAGGCAAGTGCCTTCATGCAACAGGTCAAAAGCCTTGTTGATCTCTCCCAAGGTCATGTTGTGCGTTATGTACTCATCCACTT
TTATCTCCTTGTTCATATACTTCTCCACAAGCCAAGGAACTTGGGTTCGACTCTTGAAACCACCAAAAGCTGTTCCTTTCCATACA
CGGCCAGTCACGAGTTGGAACGGTCGGGTTGATATCTCTTGTCCTGATGCTGCAACACCAACTATAACCGAAGTTCCCCATCCCTT
GTGACAGCACTCCAATGCGGCTCTCATCACGGAGACATTCCCAATACACTCAAAGCTGTAGTCAACACCGCCATCAGTGAGATCAA
CAATCACTTCCTGTATAGGCTTTTGGTGGTCCTTTGGGTTCACAAACTCATTAACACCAAACTTCTTTGCAGTTTCATACTTCTTG
CTGTCGATATCAATGCCAATGATCCTTGTAGCACCAGCTGTTTTCGCACCCTCAGCAACAGCAAGGCCCACGGTCCCAAGACCAAA
AATGGCAACATTTGAGCCAGGCTCTACTTTTGCAGTGTTCCAAACTGCTCCAAGGCCAGTGGGAACACCACAACCAAGAAGGCAGA
CTTTGTCCAAAGGAGCGTGAGGATCAATCTTGGCGACACTAACATCATGAACAACAGTGTACTGACTAAAGGTGGAGGTACCCATG
AAGTGATAAATGGGTTTTCCATTAACGGAGAAGCGGCTCTTACGGTCGTTCATCATGACCCCAACACCAGTAGCGGATCGAACCTT
GCCGCAGAGGTTAGTCTTTCCAGATTTGCAGAACTTGCATTCACGGCACTCCGCTTGGTAACAAGGGATGACATGATCCCCTGGTT
GAACTTCACTTACACCTTCACCAACACTCTCAACAATCCCAGCAGCCTCGTGACCGAGGATACAAGGAAAGAGACCTTCGGGATCC
TTGCCGCTCCAAGTGTAGGCGTCGGTGTGACAGAGAGCGGTGAAGAGGATCTTGATCCGAACCTCACCGGCCTGAGGGGGAGCCAC
TTGCACATCTTCGATCACCAGTGGTTTGTTCGGCTCGTATGCCACCGCAGCTTTGCATGTGATAACCTGTCCTTGAGTCGCCATTG
ACGCACGCACGCACGAGGATAGATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGTTAAATCAAACGTAGATTTCAA
GCAATGGCATCGATGACAATGACAGCAACGTTCCTCCCAGCCGTCGCTAAGCTTCCGTCGCCCACCGCAGGACGAAGGATGTCCAT
GGTCAGAGCCTCAACGAGCGAGAACACACCCAGCGTAGAAGTCAAGGCCAAGGAGGAACAGAAGAGCACCACAATGAGGAGGGATC
TCATGTTCACGGCTGCAGCTTCTGCCGTTTGTGCCTTGGCTAAGGCAGCCATGGCAGACGAGGAGGAGCCCAAGCGAGGGACAGAA
GCGGCTAAGAAGAAATACGCTCAGGTCTGCGTCACAATGCCTACGGCTAAGATCTGCCGCTACTGATTCAACCATCCCACCTTTCA
TGTCCTTCTCTCTATCTCTTTCTATTGTTCGGTAAATTTTCTCAAATTTGGTATGTAACCATATATATTTGAATCATAATCTCGGA
C
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199207 alcohol dehydrogenase class-3 [Arabidopsis thaliana] | 1969 | 3e-218 |
| CAA57973 class III ADH, glutathione-dependent formaldehyde dehydrogenase [Arabidopsis thaliana] | 1965 | 8e-218 |
| AAB06322 glutathione-dependent formaldehyde dehydrogenase [Arabidopsis thaliana] | 1962 | 2e-217 |
| XP_002865392 glutathione-dependent formaldehyde dehydrogenase [Arabidopsis lyrata subsp. lyrata] | 1961 | 2e-217 |
| ACR40091 S-nitrosoglutathione reductase [Brassica juncea] | 1956 | 9e-217 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96533 Alcohol dehydrogenase class-3 | 1969 | 1e-219 |
| A2XAZ3 Alcohol dehydrogenase class-3 | 1846 | 2e-205 |
| Q0DWH1 Alcohol dehydrogenase class-3 | 1843 | 5e-205 |
| P93629 Alcohol dehydrogenase class-3 | 1823 | 1e-202 |
| P80572 Alcohol dehydrogenase class-3 | 1810 | 3e-201 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C4PKK5 S-nitrosoglutathione reductase (Fragment) | 1956 | 6e-217 |
| B9T5W1 Alcohol dehydrogenase, putative | 1880 | 4e-208 |
| C5XVU9 Putative uncharacterized protein Sb04g037050 | 1854 | 4e-205 |
| B9GRB3 Glutathione-dependent formaldehyde dehydrogenase | 1847 | 3e-204 |
| D2Y3F4 Alcohol dehydrogenase class III | 1843 | 8e-204 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G43940.1 HOT5 (sensitive to hot temperatures 5); S-(hydroxymethyl)glutathione dehydrogenase/ S-nitrosoglutathione reductase | 1969 | 1e-220 |
| AT1G77120.1 ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase | 1223 | 3e-134 |
| AT5G24760.1 alcohol dehydrogenase, putative | 1067 | 4e-116 |
| AT1G64710.1 alcohol dehydrogenase, putative | 1029 | 1e-111 |
| AT5G24760.2 alcohol dehydrogenase, putative | 991 | 3e-107 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
