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Information for unigene UN23091

FASTA Sequence
Unigene ID: UN23091Length: 1118  SNP
CAGCAAATAAAAAGATTTATTATTATGACACTATTTTCTACAAGTAAAACCATGGAAGGTTCAAGTAACTAAATGAAATGGAATCA
TGGAGTTCAGTTTCCAAGCAGTACCAAAAAATTGTATAAGATATGAGGAGAAAACGTTTATGGATGGATCTACACAAAACCTTTTC
AATACACCCTTTTGTGAATCATACGGTGACAGTGAACAGATAGAGCTTCAAAACAACCGCAAGCCCTAGCTGCAAAAGAAAGATGC
TTGCTATTATCAGGATCGATCTCTCTCCAGCGGAATTGATATGTGCTTTGAGGTTCAAAGCCACAAATGTTGCAGACATGAACCCT
GCTACACCCGCGATGACCCATCTGAAGATCTCCACTGGCACGACCGAGAGGCACAATGCGGGGATAAAGATGAAGAGGGAATAGCC
GTAGAGACAGAAGAGCTGGACTAGTCCTGAAGGTGCAGAGAAGTATTTGAGAACGACATATAACGCGAGAGGAACAAGCGTGACAT
AGCCATAGAACACTCCTGCTGACCAAGTCACAAGATTGATATCGTAGTTCCATTCTTGTTTCTTCCATTTGTGTGCTACGTAGGTG
ACAAATGTGCCAATAGATGCCGCCACGAATATCAAAGTCGTGCATATCCAAAATGGACCATACAAGTCAGGCTTATCGGCAGTTTT
TTCTGTAAAGGTTCCACGGAACGGGAAGAGAGATTCTTTGAGCCTGTCCACAACATCAGAAGTGTCGACATCAAAGAAAGGCTTGT
AAGCACCAACAGTGAACTTATGGAGCCAGCCACCAGACTGAGGTTCGTCTGTACCACCATTACCATTCCCAGAAAATGTATCGTCA
GCATCTCGAGGAGGATTACTACCACCAGAGATCTTGCCCTGAGTAGCAGACGGAGGAAAGGTTTGAAGATTTGACTCTGCGAATTT
GACGGTGGTATGGCCTGGATCTGGAACGGAAGGTACAGATCCAGAGACTTTCTGGCTGTCAATAGTCGTGTAGCTCCCGCCGGTCA
TCATCTTGCTCTCCCTCCCTCCTTCCCGATCTTCCTTCCGTCTCCGTATAACTCAAACTCTCTCAGAAATCGAATTTGGCCTCGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187179 Integral membrane Yip1-like protein [Arabidopsis thaliana]14271e-155
AAF27034 unknown protein [Arabidopsis thaliana]14224e-155
XP_002884498 integral membrane Yip1 family protein [Arabidopsis lyrata subsp. lyrata]14045e-153
NP_198101 Yip1 integral membrane domain-containing protein [Arabidopsis thaliana]13419e-146
AAR23733 At5g27490 [Arabidopsis thaliana]13302e-144

Swiss-Prot top hits (Blast detail)Scoree value
Q54TS4 Protein YIPF1 homolog3818e-036
Q9Y548 Protein YIPF13047e-027
Q91VU1 Protein YIPF13012e-026
Q5RBL0 Protein YIPF13012e-026
Q6P6G5 Protein YIPF12993e-026

TrEMBL top hits (Blast detail)Scoree value
Q8GWB3 Putative uncharacterized protein At3g0528014277e-156
Q9MA91 T12H1.25 protein14223e-155
Q6NPD4 At5g2749013301e-144
B9RF52 Protein YIPF1, putative12118e-131
B9MZU7 Predicted protein12072e-130

Arabidopsis top hits (Blast detail)Scoree value
AT3G05280.1 integral membrane Yip1 family protein14283e-158
AT5G27490.1 integral membrane Yip1 family protein13423e-148
AT2G39805.2 integral membrane Yip1 family protein4686e-047
AT2G39805.1 integral membrane Yip1 family protein4614e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  40%
 
106  40%
 
122  13%
 
111  7%

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