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Information for unigene UN23104
FASTA Sequence |
Unigene ID: UN23104 | Length: 1079 |
SSR | | GGGAGAGAGAGAGAGGCGGAGAAGAGGAAAGTGAGAAAGCTTTAAAAGCAAATCGTGAGAGACCTCTCGAGTCTTCCCTGAGTCAC
TCCCCTCTCTTCTCTCGCGGCGCTCTCCTTCGATTTACCTTGTTAGGGTTTTCGCTTCGCCTGCACAACACACGATGCATAAGTTG
AGTAGAAGCAACCGCGATAAACTTCAGCAGTTCGTGGCTATCACTGGAGCTAGTGAGAAGAATGCTCTTCAGGCTCTCAAAGCCTG
CGATTGGCAGCTCGAAGCAGCTTTTGATGTCTTTTACAGCCAGCCTCAGCCAAGAAGCAATGGCGATATGAGACGCTTGGAGGAGC
TCTACAATAGATATAAAGACCCCTATTCTGATATGATTCTGGCCGAAGGTATCTCGGTTCTGTGTAGTGATCTTCAGGTGGAACCC
CAAGACATTGTCACGTTGGTTCTTTCGTGGCATATGAATGCTGCCACAGCGTGTGAATTTTCCAAGGAAGAATTTTTTGGTGGATT
ACAGGCATTAGGAGTAGATTCCATTGGGAAGTTGCAGGAAAAGCTGTCCTTTATGCGTTCAGAGCTTAAAGATGAACAAAAGTTCC
ATGACATATACAACTTTGCTTTTGGGTGGGCGAAAGAGAAGGGGCAGAAGTCTCTTGCTTTAGATACAGCGATTGGGATGTGGCAG
TTGCTCTTTGCAGAAAGAGAGTGGCCATTGGTGAATCACTGGTGTGATTTCTTGCAGGATCGTCACAACAAGGCCATATCTAAAGA
CACATGGGCACAGCTCCTGGAGTTTGCAAGGACTGTGGACCCAGCGCTGTCGAATTACGATGCAGAAGGAGCATGGCCTTACCTCA
TCGATGAGTTCGTTGAGTACCTGTATGACAAGAGCGTTGTTGAGAAGTAACTGGCCAATTGGGAGAAGTACTCAGCTCTATTTTCA
CAGTGGTCCTTGCTCATTATTTATTAATAGACTTTTGTGTGTTCTTGTCCGAATCTTCATCTTCATATTTTGATGATCAAATAACT
AAGATGTCCAACTTTCAGACTAATCCAGTTTCTATCTTCTATTACCA
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GenBank top hits (Blast detail) | Score | e value |
NP_566436 uncharacterized protein [Arabidopsis thaliana] | 1224 | 3e-132 |
AAK93603 unknown protein [Arabidopsis thaliana] | 1219 | 1e-131 |
ABI49160 SM10-1 [Nicotiana tabacum] | 1066 | 7e-114 |
CBI24165 unnamed protein product [Vitis vinifera] | 1066 | 7e-114 |
XP_002518833 Defective in cullin neddylation protein, putative [Ricinus communis] | 1058 | 6e-113 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8BZJ7 DCN1-like protein 2 | 552 | 1e-055 |
Q96GG9 DCN1-like protein 1 | 545 | 8e-055 |
Q6PH85 DCN1-like protein 2 | 544 | 1e-054 |
Q5ZKU1 DCN1-like protein 1 | 543 | 1e-054 |
Q9QZ73 DCN1-like protein 1 | 539 | 4e-054 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9LTV9 Gb|AAF04863.1 | 1224 | 2e-132 |
Q949S1 Putative uncharacterized protein At3g12760 | 1219 | 8e-132 |
Q09K05 SM10-1 | 1066 | 5e-114 |
B9RYL4 Defective in cullin neddylation protein, putative | 1058 | 4e-113 |
B9HI46 Predicted protein | 1054 | 1e-112 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G12760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15860.2); Has 628 Blast hits to 626 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 99; Plants - 64; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). | 1225 | 1e-134 |
AT3G28970.1 AAR3 (antiauxin-resistant 3) | 256 | 2e-022 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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