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Information for unigene UN23104

FASTA Sequence
Unigene ID: UN23104Length: 1079 SSR 
GGGAGAGAGAGAGAGGCGGAGAAGAGGAAAGTGAGAAAGCTTTAAAAGCAAATCGTGAGAGACCTCTCGAGTCTTCCCTGAGTCAC
TCCCCTCTCTTCTCTCGCGGCGCTCTCCTTCGATTTACCTTGTTAGGGTTTTCGCTTCGCCTGCACAACACACGATGCATAAGTTG
AGTAGAAGCAACCGCGATAAACTTCAGCAGTTCGTGGCTATCACTGGAGCTAGTGAGAAGAATGCTCTTCAGGCTCTCAAAGCCTG
CGATTGGCAGCTCGAAGCAGCTTTTGATGTCTTTTACAGCCAGCCTCAGCCAAGAAGCAATGGCGATATGAGACGCTTGGAGGAGC
TCTACAATAGATATAAAGACCCCTATTCTGATATGATTCTGGCCGAAGGTATCTCGGTTCTGTGTAGTGATCTTCAGGTGGAACCC
CAAGACATTGTCACGTTGGTTCTTTCGTGGCATATGAATGCTGCCACAGCGTGTGAATTTTCCAAGGAAGAATTTTTTGGTGGATT
ACAGGCATTAGGAGTAGATTCCATTGGGAAGTTGCAGGAAAAGCTGTCCTTTATGCGTTCAGAGCTTAAAGATGAACAAAAGTTCC
ATGACATATACAACTTTGCTTTTGGGTGGGCGAAAGAGAAGGGGCAGAAGTCTCTTGCTTTAGATACAGCGATTGGGATGTGGCAG
TTGCTCTTTGCAGAAAGAGAGTGGCCATTGGTGAATCACTGGTGTGATTTCTTGCAGGATCGTCACAACAAGGCCATATCTAAAGA
CACATGGGCACAGCTCCTGGAGTTTGCAAGGACTGTGGACCCAGCGCTGTCGAATTACGATGCAGAAGGAGCATGGCCTTACCTCA
TCGATGAGTTCGTTGAGTACCTGTATGACAAGAGCGTTGTTGAGAAGTAACTGGCCAATTGGGAGAAGTACTCAGCTCTATTTTCA
CAGTGGTCCTTGCTCATTATTTATTAATAGACTTTTGTGTGTTCTTGTCCGAATCTTCATCTTCATATTTTGATGATCAAATAACT
AAGATGTCCAACTTTCAGACTAATCCAGTTTCTATCTTCTATTACCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566436 uncharacterized protein [Arabidopsis thaliana]12243e-132
AAK93603 unknown protein [Arabidopsis thaliana]12191e-131
ABI49160 SM10-1 [Nicotiana tabacum]10667e-114
CBI24165 unnamed protein product [Vitis vinifera]10667e-114
XP_002518833 Defective in cullin neddylation protein, putative [Ricinus communis]10586e-113

Swiss-Prot top hits (Blast detail)Scoree value
Q8BZJ7 DCN1-like protein 25521e-055
Q96GG9 DCN1-like protein 15458e-055
Q6PH85 DCN1-like protein 25441e-054
Q5ZKU1 DCN1-like protein 15431e-054
Q9QZ73 DCN1-like protein 15394e-054

TrEMBL top hits (Blast detail)Scoree value
Q9LTV9 Gb|AAF04863.112242e-132
Q949S1 Putative uncharacterized protein At3g1276012198e-132
Q09K05 SM10-110665e-114
B9RYL4 Defective in cullin neddylation protein, putative10584e-113
B9HI46 Predicted protein10541e-112

Arabidopsis top hits (Blast detail)Scoree value
AT3G12760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15860.2); Has 628 Blast hits to 626 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 99; Plants - 64; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).12251e-134
AT3G28970.1 AAR3 (antiauxin-resistant 3)2562e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1210  29%
 
108  23%
 
116  17%
 
76  17%
 
62  6%
 
82  6%
 
91  3%

Unigene MembersMember information