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Information for unigene UN23120

FASTA Sequence
Unigene ID: UN23120Length: 831  SNP
AACACAATATTTTACTTTTATAATCTAAATGCATCGTAGTAATGTATCACATATCTGCTATGATGGCATTACACAATATTGAAACT
TCACCAATTTCTAAACCAAACTAAAAAATTACAAAGAAATAGAAAGAAAGCTAACTACACTTCACATTTACCAAAAACATCATATT
GTTAGACAGTTTAAGATAACGGTAAACAGCAGACAGACTTGATTTACTGCTGCTTCCGTAGTAATAAGTTGCCACACTGCCATTTT
TTCATTTCTGTCTTGAAATCATCATCACTACTATTATTATTGTAAAATAACTGAAACAGCTGAAGAAGATTCATCTCCTCTCATCG
GTCTCTATGATAAGATACACCTTCAAGCTTTAACGCAGCAGTTGAAGCAGCTGAAGATTCCTCTCCTCGCAGATGGAGAAAGTGGC
TGGTGATGAGAGAAGTCATTGTGGGTTTTGTTGTTGTTGTCACTGTGAACAGTGGTGAGCTTAGGCTTATCAACCGAAGTAGGTTG
ATTATGAAAAGGATTAACGAGTTCTTCCTCGTTGCCAAGACTGGCACGAGAAGGATCTCTCTTGTTCTGTTTCCTCATCTCTCTGA
TCTTAGAGAAATCCATAGAGTAATCAGGAATGGTTCCTCCTTTCTGATCCCAATCTCCAAACTGTGGTACTGATAGCCATGGCGAG
TTCTTGTTCTCCTTTGGATCTTCCATATGATCAAATCTGTAGAGAGTAGTAGTAAAGAATCCTCCTTTTCTGAATTAACTTTTTCA
ATCAAAAGAAGAAGAAGATGATGATCTTATCGTGGTGATACAGAGGAATGAATGAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864926 hypothetical protein ARALYDRAFT_496705 [Arabidopsis lyrata subsp. lyrata]4931e-047
NP_568998 uncharacterized protein [Arabidopsis thaliana]4787e-046
AAM64656 unknown [Arabidopsis thaliana]4779e-046
ACK44531 AT5G09960-like protein [Arabidopsis arenosa]4105e-038
XP_002871394 hypothetical protein ARALYDRAFT_908947 [Arabidopsis lyrata subsp. lyrata]4024e-037

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WN19 At5g648504785e-046
Q8LBN9 Putative uncharacterized protein4776e-046
B7U9U8 AT5G09960-like protein4104e-038
Q67XU1 At5g099603952e-036
Q8LF39 Putative uncharacterized protein3952e-036

Arabidopsis top hits (Blast detail)Scoree value
AT5G64850.1 unknown protein4846e-049
AT5G09960.1 unknown protein4093e-040
AT5G19473.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Defence response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1469e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  44%
 
116  38%
 
122  13%
 
101  6%

Unigene MembersMember information