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Information for unigene UN23121
| FASTA Sequence |
| Unigene ID: UN23121 | Length: 1524 |
SSR | SNP | CTTTGAAACTTGATTTTATTAATTTTCATTTTCGATTTTCTGGGAGATATCTATTTTGTCACAAAGCATGCAAGTTTATTAATAAT
AAACGAAGGAAACAATTAAAATTCTACAACTTTCCACATTCAGTGGGAACAAACGACACCTTATCCTTCTCAAGATCATGAACTAC
ATTAAAATTCTGCTGCTGAAAATTTCCAAAAACAGACATCCCATTAGATTTCCCCATAGCCAAACACAAAACACCAGCTACTCGGA
TCCTCCACCATGTAATTATCACCGGGAAGCTCCAAATCCGCACCCTTAAAATGAAAAACCAGCTTAGGAACAGCGACATTCTTAGC
CTCATTAGATAACGTATAGCACAAGTCAAGTCCTGTGGATCCTGATTCATCAACCGGTAAACTCATCCGCGAAGTAAACTCCTTCT
TCAAGCTATTAAACACCTCCTCCTCTAGATACGTGAGGGTCGTGCCAGAGTCTATGATCATGCCTCCTGTTCCATCTTCAGCTAGT
TCGAACATAGACTTCTCTATAGAAAGACGTTTTGAACCGACGGTGATGCCTTGTAGGTCAAGGTAATAGAACGAGGGCTGACTAGG
GTTTCGTAGCAAGGAAATGGTTTTGGTGGCTTCACCTTCTAACCTCCCACCGCTTTTCTTGACTATATTCGAGGCTAGAGATCCAA
TAAACAGAGAGCTAGATGCTTTGGTATCATCAATAGCGGTCAAGCAATAAGAGAACTTAGTCTCCTTGAGCTGAGAAATAAGCGAG
AGCGGTCCACGACCAAGACCTACAAGACCCGACCCTTGAGAGAACCCGTCTCCTTCGTTCTCATCGCCACACCCAAACCCTATACC
CGAAACCGAGTTTTCGCCACCGAAAGTGAACGTTTCCTTGGCCAAGACCCCTCTTGTGGACGAGTAATCTCCATAGGTATACAAAT
ACTCACAAGCTCCTTCGTCTTGGTTGCAGCTAGACCGAGGCAATGCGTAGCAAAGACCAGAAGAGCATCCAATTTTTGTGTAAGAA
GAAGACCTTTTCGGGTCGAAAATAGGAGATGGTTGGTCGTAACACTCGGTGCAAGGCTTGCATTGCGTCCATATAAGGTCACTTCC
GGTATCTAATATAGCAGAGTATTTAGCCGGAGGGTTTCCTATAGCTAAATCCACAAGAAACTCGCCGCTTCCTCCATGAGTAGGTG
CTTTGATGTTGTTGGTATCATCAGGACTAGATGATACAGACAAAACAGCTGCAGCTCCTAACCTGTTTAGCCTGTGGAATCCGCGG
TTAATACCTCTTTGGATCTTTTGGATCTTTGTGAGGTTTTTACCGGAGTCTACGTGTTGTAGACTTAATCGAAAACCGGATCTTGG
AAGGTTTGTTGGAGGAGGATGGCTGGTTAATGATTTTCTTGATGATGAAAGAGCGATGAAACATGAGAAAATGATAAGAAAGAAAG
GGAGTAACAAAGAAGAAGCCATGGTTTGTGTGTGTGTGTGAGAGATTAGTGGATGATGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876869 aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] | 1805 | 2e-199 |
| NP_565298 aspartyl protease-like protein [Arabidopsis thaliana] | 1793 | 6e-198 |
| AAC34482 putative chloroplast nucleoid DNA binding protein [Arabidopsis thaliana] | 1354 | 4e-147 |
| XP_002522914 Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] | 1250 | 5e-135 |
| XP_002300215 predicted protein [Populus trichocarpa] | 1221 | 1e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q766C3 Aspartic proteinase nepenthesin-1 | 780 | 7e-082 |
| Q766C2 Aspartic proteinase nepenthesin-2 | 517 | 2e-051 |
| Q9S9K4 Aspartic proteinase-like protein 2 | 176 | 7e-012 |
| P69476 Aspartic proteinase nepenthesin-1 (Fragments) | 162 | 3e-010 |
| P69477 Aspartic proteinase nepenthesin-2 (Fragments) | 128 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84M99 At2g03200 | 1793 | 4e-198 |
| O81054 Putative chloroplast nucleoid DNA binding protein | 1354 | 3e-147 |
| B9SA95 Aspartic proteinase nepenthesin-1, putative | 1250 | 3e-135 |
| B9GH97 Predicted protein | 1221 | 8e-132 |
| B9N2J4 Predicted protein (Fragment) | 1221 | 8e-132 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G03200.1 aspartyl protease family protein | 1793 | 2e-200 |
| AT5G33340.1 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase | 620 | 2e-064 |
| AT1G64830.1 aspartyl protease family protein | 614 | 1e-063 |
| AT3G61820.1 aspartyl protease family protein | 532 | 3e-054 |
| AT1G31450.1 aspartyl protease family protein | 520 | 8e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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