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Information for unigene UN23141
| FASTA Sequence |
| Unigene ID: UN23141 | Length: 1008 |
| SNP | GGAGCCCATTATAGAAGAAATGGGTCACGAAACGCAGCGTATGAGAACGACGACGTGCGTCGTCTAGGTAGCTTTGACTGCTGGCT
GCTCCGACGCTGATTGTGCAACGTTCGCAAGGGTGACGGAAAATCCCAGTGAATACAGAGAGACATGTCAAGGTTTCGATCATTGT
TGCAAGCCTCAGTAAATGCAACGAAGAAGGCTTTTACGTGGAACATTGAAGAATGGGTACCACCTGCAGAGAAGTATATATTTAAG
TTCCATTCGAAAGAAGACTTGAAGAGATGGCATCTCTATTCTGATTCTCAATATGGAGGATTATCTTCGGCTTCCTTGGAGATCCC
AGATGGAGGAAAAGGATCAGATGGAACTGGAATTTTCTCAGGGAACCTTTCCGTAGACCTCAGTGAGGGATCAAAGTTGAACATCA
GTCGGAGTGGCTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGCTTCATTGATCTCGACGGGTATGATGCAATAGCCATGAGGCTT
AGAGGAGATGGAAGGTGTTATATCTCTACCATCTATACCGAGAATTGGGTGAACTCACCGGGACAAACAGAAGATAACTCGTGGCA
AGCTTTTGTCTTTGCTCCAAAGGACAGGTGGTATACTGCTAAGATCCCTCTAGCTCGATACTTGCCAACGTGGAGAGGAAATGTTA
TAGATGTGGAAATGGAGATGAATCCAGGTCGAGTTCTGGGTATGTCACTGTCGGTAAACGCAGAAGGTGGTGCGGTTGGAGCTAGA
TCAGGAGCAGGTGATTTCAGAGTTGAGATTGACTGGATCAAAGCCTTGAGAATGCCATGAATGGGTGAGAAGCATTATTGGCAATG
TATGATGTCTTCTTTGTTTTAGCTCTGTGAAAACCAGGCCTGAGTTGTGATACTTGGTGGCCAAATAGATTTGTTGAATTGTAATT
GGTCAACACTTTGAGCAATGTTTTAACTATGTTCATCAAATAAAAAGAACATGATACAAATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173178 putative complex I intermediate-associated protein 30 [Arabidopsis thaliana] | 1143 | 7e-123 |
| XP_002890222 hypothetical protein ARALYDRAFT_471939 [Arabidopsis lyrata subsp. lyrata] | 1136 | 5e-122 |
| XP_002888873 hypothetical protein ARALYDRAFT_895093 [Arabidopsis lyrata subsp. lyrata] | 1037 | 1e-110 |
| NP_177386 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 [Arabidopsis thaliana] | 1027 | 2e-109 |
| XP_002268906 PREDICTED: hypothetical protein [Vitis vinifera] | 969 | 1e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LQI7 Probable complex I intermediate-associated protein 30 | 1143 | 3e-124 |
| Q9VAI1 Probable complex I intermediate-associated protein 30, mitochondrial | 171 | 2e-011 |
| Q0MQ83 Complex I intermediate-associated protein 30, mitochondrial | 156 | 9e-010 |
| Q0MQ84 Complex I intermediate-associated protein 30, mitochondrial | 148 | 7e-009 |
| Q9Y375 Complex I intermediate-associated protein 30, mitochondrial | 146 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C9E0 Putative uncharacterized protein T10D10.11 | 954 | 4e-101 |
| B8A8Z8 Putative uncharacterized protein | 940 | 2e-099 |
| B9EZI0 Putative uncharacterized protein | 940 | 2e-099 |
| Q5JM48 Auxin-induced-related / indole-3-acetic acid induced-related-like | 940 | 2e-099 |
| B9HUD3 Predicted protein | 926 | 7e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G17350.1 auxin-induced-related / indole-3-acetic acid induced-related | 1144 | 2e-125 |
| AT1G72420.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: auxin-induced-related / indole-3-acetic acid induced-related (TAIR:AT1G17350.1); Has 408 Blast hits to 408 proteins in 142 species: Archae - 0; Bacteria - 97; Metazoa - 96; Fungi - 57; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). | 1028 | 6e-112 |
| AT1G17350.2 auxin-induced-related / indole-3-acetic acid induced-related | 826 | 2e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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