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Information for unigene UN23156
| FASTA Sequence |
| Unigene ID: UN23156 | Length: 2220 |
| SNP | GCTATGAAACTCCCGTCTTTCAAATCCCTAGCTCCCACCGCCATCTCCGTCGCCTCTACCTTCTCCATACGACGGAGCTTCTCCTT
CGCTCGCCGCTCCTCGTCGCTATCCGCCACCATCACCGCCGATTCTGAACCCGTCTCTCTCGGCCATCGCGCTCGTAAAGACTTCC
GAATTCTACACCAGGAAGTGAATGGGTCTAAGCTTGTGTACTTGGACAGTGCTGCGACTTCTCAGAAGCCTGCTGCTGTATTGGAA
GCTTTGCAGAATTACTACGAGTTCTATAATTCAAACGTTCACAGAGGAATCCACTACTTAAGTGCCAAGGCTACAGATGAATTTGA
GTTGGCTAGGAAGAAAGTAGCTCGTTTCATCAATGCTTCCGATGCTAGAGAGATTGTTTTCACTAGGAATGCAACTGAAGCCATCA
ATCTTGTTGCTTATTCGTGGGGTCTTTCTAACCTCAAACCAGGGGACGAGGTTATACTTACAGTGGCTGAACATCACAGTTGCATT
GTTCCTTGGCAAATTGTATCTCAAAAGACTGGAGCAGTTCTGAAGTTTGTGACTTTGAATGAAGACGAAACCCCGGACATAGACAT
GTTGAGAGAAATGATTTCTGGAAAGACAAAACTCGTGGCTGTTCATCATGTATCAAATGTTCTTGCATCTTCTCTTCCTATTGAAG
AGATAGTGGTCTGGGCACACGATGTTGGAGCGAAAGTTCTTGTGGATGCGTGTCAAAGCGTTCCCCACATGGGGGTTGATGTCCAG
AAGCTAAATGCTGATTTCTTAGTCGCGTCTTCTCACAAGATGTGTGGACCTACAGGCATTGGGTTCTTATATGGTAAGAGTGATCT
TCTACTTGCCATGCCTCCATTCTTAGGTGGCGGAGAAATGATCTCAGATGTATTTCTTGATCATTCGACTTATGCGGAACCTCCAT
CCAGATTTGAAGCTGGAACACCTGCAATTGGTGAAGCAATTGCCCTTGGAGCAGCATGTGATTACTTGTCAGGTATCGGCATGCCG
AAAATCCATGAATATGAGGTAGAGCTTGCTAACTATTTGTACGAGAAACTGTCTTCAGTGCCTGATGTTCGGATATACGGCCCAAG
GCCTTCTGAAAGTGTTCGACGGGCAGCTCTTTGTTCCTTCAATGTGGAGGGACTGCACCCAACTGATTTGGCAACCTTTCTTGATC
AACAGCATGGAGTTGCGATAAGGTCAGGACACCACTGCGCGCAGCCACTACACCGGTATCTTGGAGTGAATGCAAGTGCACGCGCC
AGCCTTTACTTTTACAACACAAAGGAGGACGTTGACTCCTTCATCGTTGCACTTGCAGATACTGTGAGCTTCTTCAATTCTTTCAA
ATAGAATGGCGTACACCTTAATACTGGATCTCGCAGCTTGTTGTATGCTTATATATATGCTTCAAAGGCTATTTTTACTTATCATC
TTCAAGTCCCAATATTTTGAGGCCATTACATTGGTTTATTTCAAATTCAGTTCCACAAATTTTCAAAACACTCTCCATGTGAGGAC
ATGTATTATTGAAACAAAGAAATAAACATCTTCTACGAGTGAGAACATAATAAAAAGGTCTGAAATGGATTTAACTTATCACATTT
CAAGCGGCATGCGTCTTTGTTATTTTGGATTCAAGACCTTTCATTGAGACTTGCGTTCCCACCATTCCATGAACTTCACTTGAGCC
GCCATTGTGTCCAGCTTATAGAGTTGCAAGGTGTGGTTCGCAACTTCTTGCCCAAAGGTCCAACCAAAAACACCTCCTCCTAAGAA
GGACAACGCAGCACCATGTGGACTCCTCGAGTATTTCCAGGCAAAAGCGGCAGTAGATACAGCTCCAAGTGCAGCTCCGGCAACAC
CAAAAGTCGCAGCTTCCCTGGCGGTTTTAAGGGTGGGTCCATGAACGGGATCGGAAGCTATGAACTCCTCAACGTCAGATGAAGAC
CAAGAAGGAAGAGGCGCCTCGCGTTTAGTGAACCTCGTGTAGTTCTCCAGGAACGACAACTTCTCCTCCCAGAACCCCTTGAATCC
ATCCGCAAACGACCTCGAGTCTCCCATCTTTGATTTGATTCTTCGCACTCTTTTTTTTTTTGTTTCTCTCTTCTTTCCTCAGATCG
AAAAATATTGAAATCGATATCACCAGACACAACACAAACAAATGTTTTCGCTCCCTACTCCTCTACGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892460 hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata] | 2122 | 6e-236 |
| NP_172325 cysteine desulfurase 2 [Arabidopsis thaliana] | 2102 | 1e-233 |
| XP_002267920 PREDICTED: hypothetical protein [Vitis vinifera] | 1849 | 3e-204 |
| XP_002523229 cysteine desulfurylase, putative [Ricinus communis] | 1836 | 9e-203 |
| XP_002314018 predicted protein [Populus trichocarpa] | 1792 | 1e-197 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93WX6 Cysteine desulfurase 2, chloroplastic | 2102 | 5e-235 |
| Q55793 Probable cysteine desulfurase | 1348 | 1e-147 |
| O32164 Probable cysteine desulfurase | 1085 | 5e-117 |
| Q9K7A0 Probable cysteine desulfurase | 1075 | 7e-116 |
| Q5HHH0 Probable cysteine desulfurase | 1035 | 3e-111 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SB60 Cysteine desulfurylase, putative | 1836 | 6e-203 |
| B9HNK4 Predicted protein | 1792 | 8e-198 |
| A9NXQ9 Putative uncharacterized protein | 1708 | 4e-188 |
| B4FA19 Putative uncharacterized protein | 1586 | 6e-174 |
| A9RHM8 Predicted protein | 1514 | 1e-165 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08490.1 CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE); cysteine desulfurase/ selenocysteine lyase/ transaminase | 2103 | 4e-236 |
| AT1G08480.1 unknown protein | 667 | 1e-069 |
| AT5G65720.1 NFS1; ATP binding / cysteine desulfurase/ transaminase | 260 | 2e-022 |
| AT5G65720.2 NFS1; ATP binding / cysteine desulfurase/ transaminase | 182 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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