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Information for unigene UN23166
| FASTA Sequence |
| Unigene ID: UN23166 | Length: 1265 |
SSR | | TTTTTTGGGAACCAAACCTTTCCTTAGATAGATTACAACACAACATAAAACAAAAGAAAAGCATGTGAAAAGCTTAAAACAGTTAT
TAACATGTTCTGAGACAGCAACAGAGGAAAGTGTACCACAATCTACCTCCGCTTTACTTCATGTCTAAACTAGGAATCTATAACAA
TAAAACCTTGTATAATAATATATATATTTCATAAATGTTTTATACGTATGCTGCTGCTTCTTTTTTAGTGACTAACATTGGAGATC
GAAGTTTATTTAGTGATCTTGTGCCAGCTTTCTTACGTTATCACTGTTATTCACTATGATCTTTCGAAACCACCTCCTACCTGCAT
ATGCAGCCACTCCGGTGATGCTCCTCTGCTGTAGTCCCTTGTAGCTTGTGACCCGAACTGCATTCCCGGATTTTCAAACGTTTGCT
GATCAAACTCTTTTGGCGGGAAAACCTCGATACCAGGAGTCATTCTTGAGTTGACTGCTTCGAGCTTCATCGATAGAAACTCAACT
TGACGCTGCAGAGACTGTATGTAATTGATTATCTCATCTAGAACAAGCGCCTTTCCGATAACCTTGTTACAACCAGGGACAAGATC
TTGCAAGATTTTCATCCGCTCGCTTATCTTTTCTCTCCTCGCTCTTTCAGCTAGACTGTGACTATCTGTAGCCTGTCCCCTTCTAG
CTCGCACATGTATATAATCTTTCGGAGGTTCAGGCAACAACTGCTTCTTCTGATCCAACGTTCCTGTTTCAACCTCATCTTCGCAT
CCTGTAGTCCTCTGCTTTTTACTCTCACCATCATTCGCGTCATGTCCGTCGCTGCTGACGGAGAAGACTTTCTCCTCCGCACCTGC
TTCCCGCCGCTTCCTAGCACCGGCGATACCGGCGACCACCGCCTGAGAGAGCGCGTGGCTCATACGAGCCGGATCTTTGCTAATCA
GATTCGAGTCGGCGAACTGATGATGGACCAAGTTAGGTCCACCGAACGAGACGCCGCTCCTCATCGAGGAGTTAACGGTCCCGCCT
CCGTTGATGGGATACGACGGCCAGATCTCCGCCAGTTGGTTATACGTCCCAGCCTCGTTCATCATCCCGCCCGGATCCATCACCTG
AGAAAAACACACTCTCTATACCGAGTTGACTCAGCTGCTACCGGTTCCACTCACTAGAGAGAGAGAGAGAGAAAGGTGGATGTGAC
TTGTTTTGAGAATGCGATCTCTCTCCTTAGACAGTGGAGTCTGATGCGCACTGTGTCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886670 hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp. lyrata] | 852 | 6e-089 |
| AAM64440 unknown [Arabidopsis thaliana] | 841 | 1e-087 |
| NP_564749 transcription factor BPE [Arabidopsis thaliana] | 840 | 1e-087 |
| XP_002520177 DNA binding protein, putative [Ricinus communis] | 709 | 2e-072 |
| XP_002311780 predicted protein [Populus trichocarpa] | 667 | 2e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0JXE7 Transcription factor BPE | 662 | 3e-068 |
| Q9LV17 Transcription factor bHLH79 | 457 | 2e-044 |
| Q9SRT2 Transcription factor bHLH62 | 390 | 9e-037 |
| Q9FJL4 Transcription factor bHLH78 | 389 | 1e-036 |
| Q9LK48 Transcription factor bHLH77 | 375 | 5e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S2F8 DNA binding protein, putative | 709 | 1e-072 |
| B9HLU0 Predicted protein | 667 | 1e-067 |
| Q71SQ1 MYC1 | 659 | 9e-067 |
| B9HU79 Predicted protein | 609 | 6e-061 |
| B9R912 DNA binding protein, putative | 588 | 2e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G59640.1 ZCW32; DNA binding / transcription factor | 840 | 5e-090 |
| AT1G59640.2 ZCW32; DNA binding / transcription factor | 662 | 2e-069 |
| AT5G62610.1 basic helix-loop-helix (bHLH) family protein | 457 | 1e-045 |
| AT3G07340.1 basic helix-loop-helix (bHLH) family protein | 390 | 8e-038 |
| AT5G48560.1 basic helix-loop-helix (bHLH) family protein | 389 | 1e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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