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Information for unigene UN23169

FASTA Sequence
Unigene ID: UN23169Length: 942  SNP
GGGTCTACACTGTGATCTCGTAAACATTTCTTTAACGTTTTCGATTACTTGTTTACAGGTTCAGAGATTCGTCAACTTTAGAGAAA
CTCAAGATGAGTAAGCTTCAGAGCGAGGCTCTTAGAGAAGCCATCACGACCATCAAGGGCAAATCTGAGGAGAAGAAGCGTAACTT
TACGGAGACTGTTGAGCTTCAGATTGGTCTGAAGAACTATGACCCGCAAAAGGACAAGCGTTTCAGTGGATCTGTCAAGCTCCCGC
ACATTCCTCGCCCTAAGATGAAGGTCTGCATGCTTGGAGATGCTCAGCATGTTGAGGAGGCTGAGAAGATGGGACTAGACTCTATG
GATGTTGAGGCTTTGAAAAAGCTCAACAAGAACAAGAAGCTTGTTAAGAAGCTTGCCAAGAAGTACCATGCTTTTTTGGCTTCTGA
GTCGGTCATCAAGCAGATTCCCCGTCTTCTTGGTCCTGGTCTTAACAAAGCAGGAAAGTTTCCAACACTGGTGAGTCACCAAGAGT
CGTTGGAAGGGAAGGTGAACGAGACCAAAGCGACAGTGAAGTTCCAGTTGAAGAAGGTTCTGTGTATGGGTGTTGCTGTTGGTAAC
CTTTCCATGGAAGAGAAGCAGCTCTTTCAGAATGTTCAGATGAGCATCAACTTCCTTGTCTCGCTCTTGAAGAAGAATTGGCAAAA
CGTGAGGTGTTTGTACTTGAAGAGCACCATGGGACCACCACAGAGAATCTTTTGAGTTCTCGACTCCTGTCATCTTGGAACTTTTG
CTTTGTGGTTTTTGTTTGTTTCAGAGATCTTGAGTTATGGTTTTGTTTGATATTAGCAGAACTGAGGTGTTAGTTTGCTTTTTGTT
AAGACATTATAATATGCAATGTTGGATTCTACAATATCGACTCTCCGATTCAGTTTTATCTTATGAAATGCTTTCTAGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879155 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]10683e-114
NP_565654 60S ribosomal protein L10a-2 [Arabidopsis thaliana]10657e-114
NP_563813 60S ribosomal protein L10a-1 [Arabidopsis thaliana]10541e-112
XP_002889688 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]10461e-111
ABK22290 unknown [Picea sitchensis]9941e-105

Swiss-Prot top hits (Blast detail)Scoree value
P59230 60S ribosomal protein L10a-210653e-115
Q8VZB9 60S ribosomal protein L10a-110546e-114
P59231 60S ribosomal protein L10a-310053e-108
Q9VTP4 60S ribosomal protein L10a-28021e-084
Q963B6 60S ribosomal protein L10a7902e-083

TrEMBL top hits (Blast detail)Scoree value
A9NNS9 Ribosomal protein9948e-106
B3TLQ8 Ribosomal protein9948e-106
B7F845 Ribosomal protein9921e-105
B8B9K6 Ribosomal protein9921e-105
A9NNV9 Ribosomal protein9893e-105

Arabidopsis top hits (Blast detail)Scoree value
AT2G27530.1 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome10662e-116
AT2G27530.2 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome10662e-116
AT1G08360.1 60S ribosomal protein L10A (RPL10aA)10554e-115
AT5G22440.1 60S ribosomal protein L10A (RPL10aC)10062e-109
AT5G22440.2 60S ribosomal protein L10A (RPL10aC)10062e-109

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  18%
 
62  12%
 
711  65%
 
111  6%

Unigene MembersMember information