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Information for unigene UN23170

FASTA Sequence
Unigene ID: UN23170Length: 813  SNP
GGATCCACAAGAATATCTCAAAGCTTTCGATTTGATCAAATACATCAATCAACAATGGCGTTCCCTAAGGTTTTCTTCGACATAAC
CATCGGCGGGCAACCAGCGGGAAGGATCGTGATGGAGTTGTATACCGATAAGACTCCGAAGACGGCTGAGAACTTCAGAGCTCTGT
GCACTGGAGAGAGGGGAGTGGGGCGTAAGGGAAAAGCCCTTCACTTCAAGGGATCTGGCTTCCACAGAGTGATCCCTAGTTTCATG
TGCCAGGGAGGCGATTTCACCGCCGGAAACGGGACAGGAGGTGAGTCCATCTACGGTGATAAGTTCGAGGACGAGAACTTTGAGAG
GAAGCACACCGGTCCTGGTAACCTTTCCATGGCCAACGCCGGCGCCAACACCAACGGATCTCAGTTCTTCATCTGCACCGTGAAAA
CCGATTGGCTGGACGGTAAGCACGTGGTGTTCGGTCAGGTGGTGGAAGGGTTAGACGTGGTGAAGGCGATGGAGAAGGTGGGATCG
TCGTCTGGAAAGCCGTCGAAGCAGGTGGTTATCGCCGATTGTGGACAGCTCTCTTAGATGATCTGAGCTCTCTCTCCCTCTATCCT
CATTTTAATTATGGCGTCTCCCCCCTATGTTATGTTTGGTGTCTCGTTTGTATAAGTAGTCAAAAACTTGGTCTCTGTGTTCTCAT
GGCAGTCTTTTGGATTGACAGAGAGAAACTCGTCAGTCACCCTTATTACCTTACTACCATAAATAATGAGAGCTTTAACAAAAATG
AAATTAGTAATATCTCTTGCAATTAATCTGTGATTTTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195585 Peptidyl-prolyl cis-trans isomerase CYP18-3 [Arabidopsis thaliana]8399e-088
XP_002868859 hypothetical protein ARALYDRAFT_490638 [Arabidopsis lyrata subsp. lyrata]8399e-088
NP_179709 Peptidyl-prolyl cis-trans isomerase CYP19-2 [Arabidopsis thaliana]8263e-086
AAB71402 cyclophilin [Arabidopsis thaliana]8254e-086
XP_002880359 peptidyl-prolyl cis-trans isomerase [Arabidopsis lyrata subsp. lyrata]8182e-085

Swiss-Prot top hits (Blast detail)Scoree value
P34790 Peptidyl-prolyl cis-trans isomerase CYP18-38394e-089
Q9SKQ0 Peptidyl-prolyl cis-trans isomerase CYP19-28261e-087
Q39613 Peptidyl-prolyl cis-trans isomerase7598e-080
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-17581e-079
P21568 Peptidyl-prolyl cis-trans isomerase7525e-079

TrEMBL top hits (Blast detail)Scoree value
Q0WWG0 Peptidyl-prolyl cis-trans isomerase8396e-088
Q1H5D7 Peptidyl-prolyl cis-trans isomerase8262e-086
D0ELH5 Peptidyl-prolyl cis-trans isomerase7724e-080
A9P8B6 Peptidyl-prolyl cis-trans isomerase7715e-080
A9PIY0 Peptidyl-prolyl cis-trans isomerase7715e-080

Arabidopsis top hits (Blast detail)Scoree value
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase8403e-090
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase8261e-088
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase7597e-081
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase7184e-076
AT3G56070.2 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase7184e-076

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
816  33%
 
1015  31%
 
113  6%
 
612  25%
 
122  4%

Unigene MembersMember information