|
Information for unigene UN23188
FASTA Sequence |
Unigene ID: UN23188 | Length: 1217 |
| SNP | AGGCTTTAATAATATGAAAGTCTTATTCATAATCTGTTCGAAGTACAAAACACTTGCAAGAACGAGATTGTTATTTGAGAGTCAAT
GAAATACAGACTTCACCAAGAACCCTAAAAGCTTTTGTACTTGTCCTGAAGCTTGATAAAGAAGTCATTGATGTGAGCAGTGACCT
CTTGAGGTTTCTCTTGGTTGACAAAGTGACCAGCATCTTCAATCACAACTACCTCTAGAAGATTTGGAACATCTGCAGCAAACCCA
CCACCGTGAATGTACTCTTTAACCCCCGGCGTGGTGTAGACCATGTCCAAATCACCGGTCATGAACTTCACCGGAACTTGAATCTT
TGCCCCGGTCCATGGTGCAGTGAGTTCCCATGTCAGATCCATGGCTCTGTAGTAGTTCAGTCCACCGGTAAATCCTGTCTTCTCGA
ATTTGGAGACATAGAAATCGAGATCCTCCTTCGAAAACCAGTCAGGAAGTTCAACTTGTTCGCAGTTAGGGTTAGGGTTTGCTCCA
AAGGGGTTATCCTTAGGTAGAATCGGCGGGCCGAGTTCCCTCCCTGTGAAGATGTTCCTCAGAACTCTTCTTGGATCCGCACATGC
AATCTCTCTTTCAGCCTTCCCAGGTTCCTGAAATCTACAAATGTAGTAATCATCTCCAAACACAGCCTTAAAACCTTCAACAGGCT
TGACCTTAGGGTTTCTTGGCCTATACGGCACACTCAAACACACAAAGCCCTTGATCTTCTCCGGTCGGAACAAACAGAGATACCAT
CCGACAATAGCTCCCCAGTCATGACCCACCAGAAACACCTTCTCTTGATCTCCAGCAACACTGTCAAGAAGAGCCACGAGGTCACC
AACGAGGTGAAGACACGTGTACTCTGAGAAAGACTCTGGCGACTCGGAGTCTCCGTAGCCTCGGAGGTCAGGAGCTACGGCTCGGT
AACCTAGAGATGACAACCCAGTGATCTGGTGACGCCATGTGTACCAGAGATCAGGGAATCCGTGGAGGAGAAGCACCACGGTTCCT
TCTTTGGGACCTTTCTCGGCAATGTGCATTGTGATGCCATTGACGCTCACCATTCTATGATCGATTCCCTCCATGAATGTGTGTTT
TACGTTTTAAGATGTGCATAGTAGGGTTGTGATATAAATAGAGAACTTAAATGATACTTACTTTAGTTCTTTTGCGAAGTTCTTAA
CTACTTTGTTTTC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002884518 hypothetical protein ARALYDRAFT_317420 [Arabidopsis lyrata subsp. lyrata] | 1635 | 8e-180 |
NP_187211 alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] | 1624 | 2e-178 |
XP_002318980 predicted protein [Populus trichocarpa] | 1152 | 9e-124 |
XP_002283462 PREDICTED: hypothetical protein [Vitis vinifera] | 1143 | 1e-122 |
ABN08020 Epoxide hydrolase [Medicago truncatula] | 1137 | 5e-122 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P34914 Epoxide hydrolase 2 | 446 | 3e-043 |
Q6Q2C2 Epoxide hydrolase 2 | 442 | 8e-043 |
P34913 Epoxide hydrolase 2 | 339 | 7e-031 |
P80299 Epoxide hydrolase 2 | 326 | 2e-029 |
O31581 AB hydrolase superfamily protein yfhM | 320 | 1e-028 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9M9W5 Putative epoxide hydrolase | 1624 | 1e-178 |
B9I7B7 Predicted protein | 1152 | 6e-124 |
A2Q320 Epoxide hydrolase | 1137 | 3e-122 |
B9RFD7 Epoxide hydrolase, putative | 1127 | 5e-121 |
B9HXR7 Predicted protein | 1021 | 9e-109 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G05600.1 epoxide hydrolase, putative | 1625 | 5e-181 |
AT4G02340.1 epoxide hydrolase, putative | 1025 | 2e-111 |
AT2G26740.1 ATSEH (Arabidopsis thaliana soluble epoxide hydrolase); epoxide hydrolase | 989 | 3e-107 |
AT2G26750.1 epoxide hydrolase, putative | 975 | 1e-105 |
AT4G15960.1 catalytic/ epoxide hydrolase | 966 | 1e-104 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|