Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN23190

FASTA Sequence
Unigene ID: UN23190Length: 965  SNP
AAGATAAACTTTATAGAAGTTCTATTTAGCTAAGAAATCTAATAATATTATAACAACACTCCAAAATAACTTTGTCATAAAGGAAA
CTTCAAGCAAAAGTTGATAACTGCAATACAATAAACAGTTCAAGATAACCGAGGGGGCCTGATGTTTAGATGCGAATAAGAAAAAC
GAGAAGTACACAAAGGTGTGTTCCCAACATTCATATGCTGCTTAGTCTTTCCTCAAGTCCATGACTTCGGTCCTGATGCCATCGGC
CTTAAGAATCATGATCTCAAGCTTGTCTCCAGTGTAGATATCCCTCTCAGTGGCAGATGCGAAAACAGTCTTGACCAAGTCAACTG
CTTCAGGTTCGGAAAGGGGTGTGATAGCATCCTGTGCAGGGAGCAGAAGTGGGCTGGGACTCTTGAGTTGATTGTCAAGGAAAGGC
ATGATTAGAGTGGAACCAGAACCTTGAGCACTGTATCCAACCTTCTCATACGAACCAACAGCATCGTAAGTAAAGACGCATCCTTT
ACCGTCCTCGTCAAGCCCTCCAAGAACATTAAAGGCATAGTAAGGAAAAAAGCGCTTAAAGTAAAGCGTGTTGGAGAGAAGCTGAG
CCATCGCAGGACAGCTCATCTGCTTGTTATGCTGATGCTGATAAACCAAGTGCCTTGATTTCAAAACTTTCTGCAACGCTTTCACA
TCAGCCTGAAAGCCAGAGGAAGAGAGCACAGCTTTGTCTGCTAGTTTATGGATTTTGGAGTAATCGCGAGTGAGAATACTGTAACC
GGTAGACATCCGAGTATCGGCGGCGATAACGCAGTAATCCGATCCAGCTATGGCCACACATGTTCCTCCGTTGTTGTCGTAAGGAG
ACCAGTTCGCGTGCTGCTTCGTCATGGAGCTTCTCCGTCTTCAGCAAAAAAGGGATGCTTTGTTAGCAAAGAGGAAGAAGAGAGTC
GAGAGAGATTGGAGCATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA47753 proteosome subunit [Arabidopsis thaliana]11151e-119
NP_191641 proteasome subunit beta type-1 [Arabidopsis thaliana]11088e-119
NP_001030905 proteasome subunit beta type-1 [Arabidopsis thaliana]10943e-117
XP_002279266 PREDICTED: hypothetical protein [Vitis vinifera]10461e-111
XP_002511724 proteasome subunit beta type, putative [Ricinus communis]10452e-111

Swiss-Prot top hits (Blast detail)Scoree value
P42742 Proteasome subunit beta type-111083e-120
O82531 Proteasome subunit beta type-110376e-112
O64464 Proteasome subunit beta type-19042e-096
Q9IB84 Proteasome subunit beta type-1-A5502e-055
Q9IB83 Proteasome subunit beta type-1-B5502e-055

TrEMBL top hits (Blast detail)Scoree value
Q2V3M5 Proteasome subunit beta type10942e-117
B9RDD5 Proteasome subunit beta type10451e-111
C6SY64 Proteasome subunit beta type10441e-111
C6TFJ3 Proteasome subunit beta type9884e-105
A9PD57 Proteasome subunit beta type9786e-104

Arabidopsis top hits (Blast detail)Scoree value
AT3G60820.1 PBF1; peptidase/ threonine-type endopeptidase11092e-121
AT3G60820.2 PBF1; peptidase/ threonine-type endopeptidase10951e-119
AT3G27430.1 PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase1253e-007
AT3G27430.2 PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase1253e-007
AT5G40580.1 PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase1244e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  36%
 
95  36%
 
103  21%
 
61  7%

Unigene MembersMember information