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Information for unigene UN23209

FASTA Sequence
Unigene ID: UN23209Length: 940  SNP
GGACAAACTTCACCGTCTGGATCAGAGCTTCACTTGCAAACTCCAAACATGGCGAGAGGTTTAAAGAAGCATCTGAAGAGGCTCAA
TGCCCCTAAGCATTGGATGCTCGACAAACTTGGTGGTGCTTTTGCCCCCAAGCCATCTTCTGGACCACACAAGTCTAGGGAGTGCC
TTCCTCTTGTTCTTATCATCAGGAACAGGTTGAAGTACGCTCTAACCTACCGTGAAGTCATCTCCATCTTGATGCAGAGGCATATC
CAGGTTGACGGCAAGGTCAGGACCGACAAGACCTACCCTGCTGGTTTCATGGATGTTGTCTCTATCCCCAAGACTAACGAGAACTT
CCGTCTCCACTCCATCAGGGATGAGGAAGCTAAGTTTAAGCTTTGCAAGGTCCGAACTATCCAGTTCGGACAAAAGGGCATTCCTT
ACCTCAACACATACGACGGTCGCACCATCCGTTACCCTGACCCGCTCATCAAGCCCAACGACACCATCAAGCTCGATCTTGAGGAG
AACAAGATTGTTGAGTTCATCAAGTTCGATGTCGGCAACGTTGTGATGGTTACCGGAGGAAGAAACAGAGGGCGTGTTGGTGTGAT
TAAGAACCGTGAGAAGCATAAGGGAAGCTTCGAGACGATCCACATCCAGGACTCGACGGGACATGAGTTTGCGACGAGGTTGGGTA
ATGTGTTCACCCTTGGCAAAGGGACAAAGCCGTGGGTGTCTCTTCCCAAGGGTAAAGGTATTAAGCTTACCATCATTGAGGAAGCC
AAGAAGAGGCTTGCTGGTCAACAGGCTGCTTGATTTTTGTGATTTTTCCAGCTCTTTTATTATGTCTTTTAAGACGTTTTACGTTT
TCGTAGACTCGCTTTGCTTCTTTTTGTTTTGGAACTTGTGTTATTTTCTCTGTTTCAAGAATTCAACAAAAACTTCAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
O81363 RecName: Full=40S ribosomal protein S410998e-118
BAB11167 40S ribosomal protein S4 [Arabidopsis thaliana]7852e-081
NP_568179 40S ribosomal protein S4-2 [Arabidopsis thaliana]7852e-081
NP_001031846 40S ribosomal protein S4-2 [Arabidopsis thaliana]7852e-081
BAH57121 AT5G07090 [Arabidopsis thaliana]7852e-081

Swiss-Prot top hits (Blast detail)Scoree value
O81363 40S ribosomal protein S410994e-119
P49204 40S ribosomal protein S4-27859e-083
Q8VYK6 40S ribosomal protein S4-37795e-082
Q93VH9 40S ribosomal protein S4-17786e-082
P46300 40S ribosomal protein S47518e-079

TrEMBL top hits (Blast detail)Scoree value
C0Z342 AT5G07090 protein7851e-081
Q2V395 Putative uncharacterized protein At5g07090.27851e-081
Q8LJW0 40S ribosomal S4 protein7582e-078
Q2XPX5 40S ribosomal protein S4-like protein7573e-078
A9PD40 Putative uncharacterized protein7554e-078

Arabidopsis top hits (Blast detail)Scoree value
AT5G07090.1 40S ribosomal protein S4 (RPS4B)7866e-084
AT5G07090.2 40S ribosomal protein S4 (RPS4B)7866e-084
AT5G58420.1 40S ribosomal protein S4 (RPS4D)7803e-083
AT2G17360.1 40S ribosomal protein S4 (RPS4A)7785e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  33%
 
92  33%
 
111  17%
 
61  17%

Unigene MembersMember information