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Information for unigene UN23229
| FASTA Sequence |
| Unigene ID: UN23229 | Length: 634 |
| SNP | CGACAATTCACTAATTATTCCAGATCATCGAACGGTAATAACAATCCTAAAATCCGAATGTCATAACAAACCATTTATAAAACCAA
ACATAAGTTTCCAAACTCAAAGATCCAAAAACAAGACAAGTTATAACCAAAAACAACTGACAAAAGCCTAAGCTGTAAGAACAACA
GCACCACCAGCTTCCTTAATCTTCTTCTCAGCAGTCTTCGAGATAAGCTTCGCCTTCACAACGAAAGGCTTGTTCTCAGGCAAATG
ACCTTTCCCCAACACCTTGAAGAACCCGTGCTGCGTCACATCGATCAACGGAACCTTGTCCTTGGTCGATTTGGCCTTCACGTCCT
CGGGGACGAGCGACCAGAGCCTGTCGAGGTTGACGATCGGGCAGAAGAACTTGTTGCGGAGCTTGTGGAAGTACCTCATACCGACT
TTGCCGAAGTAACCGGGATGGTACTTGTCGAAGAGGATCCTGTGGTGGTGCATACCTCCGGCGTTACCGCGACCTCCGGGATGCTT
TCGGTGCTTTCCGATACGTCCATGTCCGGCGCTGACGTGGCCGCGCTTCTTCCTGTTCTTCCTGAGTCTCGTCGTCATTTTCCTCC
TGCGGCTAGGGTTTTCTGGAGAAGTAGCGCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| ABM30196 ribosomal large subunit structural protein [Brassica juncea] | 773 | 2e-080 |
| NP_177217 60S ribosomal protein L27a-3 [Arabidopsis thaliana] | 772 | 3e-080 |
| AAM62795 60S ribosomal protein L27A [Arabidopsis thaliana] | 767 | 1e-079 |
| NP_173743 60S ribosomal protein L27a-2 [Arabidopsis thaliana] | 761 | 6e-079 |
| XP_002527925 60S ribosomal protein L27a, putative [Ricinus communis] | 708 | 8e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49637 60S ribosomal protein L27a-3 | 772 | 2e-081 |
| Q9LR33 60S ribosomal protein L27a-2 | 761 | 3e-080 |
| Q56K03 60S ribosomal protein L27a | 535 | 5e-054 |
| P18445 60S ribosomal protein L27a | 535 | 5e-054 |
| Q4R723 60S ribosomal protein L27a | 532 | 1e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1Z1S1 Ribosomal large subunit structural protein | 773 | 2e-080 |
| Q7G923 60S ribosomal protein L27A; 71521-71081 | 772 | 2e-080 |
| B9SPK6 60S ribosomal protein L27a, putative | 708 | 6e-073 |
| A9P931 Putative uncharacterized protein | 705 | 1e-072 |
| B9H9L0 Predicted protein | 702 | 3e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G70600.1 structural constituent of ribosome | 773 | 1e-082 |
| AT1G23290.1 RPL27AB; structural constituent of ribosome | 762 | 2e-081 |
| AT1G12960.1 60S ribosomal protein L27A (RPL27aA) | 153 | 9e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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