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Information for unigene UN23257

FASTA Sequence
Unigene ID: UN23257Length: 661 SSR 
GGAAAAACAATCAAATTCAAAAACAATTAAAACAAAAATGGCGTTTGCTTCAAAGATCATCACATGCCTCCTCGTCCTTGCGATAT
ACATTGCCGCTCCAACAGAGTCGCACATAACGTGTGGGACAGTGTCAAGCACAATGGCACAGTGCATCAGCTACTTGACCAACGGT
GGTCCATTGCCGTCAAGCTGCTGTGTGGCAGTCAAATCATTGAACCAAATGGCTCAGACCACACCGGATCGCCGACAAGTATGTGA
GTGCCTTAAATCAGCCGGTAAGGAAATTAAAGGCCTCAATATCGACCTTGTGGCCACACTCCCTACCACTTGTGGTGTTTCACTTT
CATACCCCATTGGTTTCAACACCAATTGTGACAGTATTTCGATTTGATTGCCGTGTGAAGGAGGCTAGAGATGTACGAACGAATAA
TCAAAGTTGGCCAGCCTTTAACCTAAATAATAATTATTCTGCTGCTAATTTCTATTTTATGAAGTTTCTTATTATGTAATCATCCA
TTTCATATGGTAATAAGTAATAACGATAAGGAGCTCTCTCTCTCTCTCTCTCTTTTTCGGCGCTTTGATGTATGTATGTACACGTA
AAGTACCATCAGGAATAACACTTTGTCTTTCTCTTACATGTATATGATCAGAGTGCATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABV25703 E2B protein [Brassica juncea]5913e-059
CAA42870 E2 [Brassica napus]5904e-059
AAA91050 similar to lipid transfer protein [Brassica rapa]5871e-058
XP_002877812 hypothetical protein ARALYDRAFT_485511 [Arabidopsis lyrata subsp. lyrata]5001e-048
NP_190727 non-specific lipid-transfer protein 12 [Arabidopsis thaliana]4938e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9SCZ0 Non-specific lipid-transfer protein 124934e-049
Q9LLR7 Non-specific lipid-transfer protein 33232e-029
Q42616 Non-specific lipid-transfer protein 32846e-025
Q39950 Non-specific lipid-transfer protein2821e-024
Q42642 Non-specific lipid-transfer protein B2811e-024

TrEMBL top hits (Blast detail)Scoree value
A8CT72 Non-specific lipid-transfer protein5912e-059
Q39332 Non-specific lipid-transfer protein5903e-059
Q39404 Non-specific lipid-transfer protein5877e-059
B9H3A9 Non-specific lipid-transfer protein2964e-025
A9PJG2 Non-specific lipid-transfer protein2883e-024

Arabidopsis top hits (Blast detail)Scoree value
AT3G51590.1 LTP12 (LIPID TRANSFER PROTEIN 12); lipid binding4934e-050
AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding3232e-030
AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding3081e-028
AT2G38540.1 LP1; calmodulin binding2622e-023
AT2G38530.1 LTP2 (LIPID TRANSFER PROTEIN 2); lipid binding2551e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  100%

Unigene MembersMember information