RadishBase

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Information for unigene UN23304

FASTA Sequence

Unigene ID: UN23304	Length: 818		SNP
AGGGGACTCACTCACATAAACACCTAAAGAAGAAAAACATCAGTCTGAAAAAATGGCACAGGCTACGATGCAGTCTTCTATGGTAG GAGAGCTTGAGGTAGATGTTGAAATCAAAACCCCCGCCCACAAGTACTACCACATGCTCACCGGAAGACCACAGGATCTTCCGAAA GTCACTCCTGACAACATCAAGAGATGTGATGTGCTCGAGGGAGAGCCTGGAGAAGTTGGAAGTATCCTATTCTTCAACTATGTCGT TGATGGACAGCCAAAGGTGGCTAAGAAGAGGATTGAGGCACTGGAGCCGGAGAAGAATCTGATGGTGGCTAGGATAATTGACGGAG ATCTAATGCAAGAGTTCAAGAGCTTCTTGATCACTGTCCAGGCGACCCCAATGCAAAGAGGACCTGGAAGTGTGGTTAAGTGTCAG ATGAAGTATGAGAGGATTGACGAGAAGGTGGCTGACCCAGAGAATCTACTTGCGGCTTTTGTCAAAGCATCCAAAGACATGGACAA AATGCTTTCTTCTGAAGTCTAAGAGGATTCTTTGGATATCTGTTTATCCATCCATCTATCTATGATCTATTATCTGTCCGTCCATC TATTTATCTATTGTGTCTGGGTGTTTCGCTTGTACTTATCAATAATGTGCTCTCTCTAAGACTGAAGAGATCTAAATATGTAAGTT TGTAATAATTATACACGATGTCTAGCGTGTTACGTCCGTTTGAAGTTGTGAAAGTTGTAAACCGAATAAGTTGTGTGATGCAACGT GTTCTCTTCCCAGATCTTAAATTAAGTCCCACAATTCCTCTCTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_564190 polyketide cyclase/dehydrase and lipid transport-like protein [Arabidopsis thaliana]	557	4e-055
NP_849875 MLP-like protein 28 [Arabidopsis thaliana]	467	1e-044
NP_177240 MLP-like protein 28 [Arabidopsis thaliana]	467	1e-044
NP_001077806 MLP-like protein 28 [Arabidopsis thaliana]	467	1e-044
NP_001117579 MLP-like protein 28 [Arabidopsis thaliana]	467	1e-044

Swiss-Prot top hits (Blast detail)	Score	e value
Q9SSK9 MLP-like protein 28	467	6e-046
Q941R6 MLP-like protein 31	451	4e-044
Q9SSK7 MLP-like protein 34	443	3e-043
Q9SSK5 MLP-like protein 43	390	5e-037
Q9C7I7 MLP-like protein 165	347	5e-032

TrEMBL top hits (Blast detail)	Score	e value
O49304 At1g23130/T26J12_10	557	3e-055
A8MRH3 Uncharacterized protein At1g70830.3	467	8e-045
B3H4F3 Uncharacterized protein At1g70830.5	467	8e-045
Q3E7W3 Putative uncharacterized protein At1g70830.2	467	8e-045
Q3E8Z5 Putative uncharacterized protein At5g28010.1	455	2e-043

Arabidopsis top hits (Blast detail)	Score	e value
AT1G23130.1 Bet v I allergen family protein	563	4e-058
AT1G70830.2 MLP28 (MLP-LIKE PROTEIN 28)	467	5e-047
AT1G70830.1 MLP28 (MLP-LIKE PROTEIN 28)	467	5e-047
AT1G70830.3 MLP28 (MLP-LIKE PROTEIN 28)	467	5e-047
AT1G70830.5 MLP28 (MLP-LIKE PROTEIN 28)	467	5e-047

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	12			16%


6	8			11%


9	12			16%


7	13			18%


12	13			18%


11	13			18%


8	2			3%

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