 |
Information for unigene UN23308
| FASTA Sequence |
| Unigene ID: UN23308 | Length: 842 |
SSR | | GGGAGCTACCTAAAGAGCATCCATCTCTCTCTCTCTGCCCAAATCAAAAGGAGGATTTAAAGTCAGCGGCGAGAACATGAGTACTC
CAAGGTTAAAGTGTGTCATCGTCGGTGACGGCGCCGTCGGCAAGACTTGTCTACTCATTTCCTACACTAGAAACACTTTCACCACC
GATGATATGCCAACTGTTTTTGAAAATGTCAGCGTCCATGTGATTGTCGATGGGAGCACCATCAACTTGGACTTGTTTGACACTGC
AGGACAAGATGACTACAATAAACTAAGACCATTAAGCTATCCATTAACTGATGTCTTCTTGCTCGCATTCTCTCTTGTTGACAAAG
CTAGCTATGAAAATGTTGCTAAGAAGTGGGTTCCTGAACTCAGACATCATGCTCCTAATGTTCCCATCTTACTTGTTGGAACAAAG
CTCGATGCTCGAGATGATAAGCAAGTACTTTCTTGAGCACCCTGGAGCTGTGCCTATATCTACTGCTCAGGGTGAAGAACTAAAGA
GGCTAGTTGGAGCTTCTACTTATATAGAATGCAGTTCCAAGACACAACTGAATGTTAAAGCTGTCTTTGATGAGGCCATCAAAGTA
GTTCTCAAGCCACCCAATAACTACAACAACAACATTAGTACAGCTCAGAAAGGCTGTTCCATACTGTGATTCGAGAAAAGAATAAA
CATGAATCAACAGTTAACTAATCATTGTTTCCGAGTGCCCATTTTCTCTCATTTCCGTTAAACAAGAATTTGTCATTTGTAGTCCT
AAAAGCAGACATATCCGAACTCATTGGTCAAGTATTTAAACTTTGGGGTTGTATCTTTAAATTCTTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| CBI30636 unnamed protein product [Vitis vinifera] | 565 | 6e-056 |
| Q41254 RecName: Full=Rac-like GTP-binding protein RAC9; Flags: Precursor | 516 | 3e-050 |
| ADE75718 unknown [Picea sitchensis] | 514 | 5e-050 |
| XP_002525151 rac gtpase, putative [Ricinus communis] | 513 | 6e-050 |
| XP_002530817 rac gtpase, putative [Ricinus communis] | 512 | 8e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41254 Rac-like GTP-binding protein RAC9 | 516 | 1e-051 |
| Q38912 Rac-like GTP-binding protein ARAC3 | 510 | 6e-051 |
| O04369 Rac-like GTP-binding protein RAC1 | 508 | 1e-050 |
| Q38903 Rac-like GTP-binding protein ARAC2 | 506 | 2e-050 |
| Q6EP31 Rac-like GTP-binding protein 5 | 506 | 2e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D5A849 Putative uncharacterized protein | 514 | 3e-050 |
| B9SGN2 Rac gtpase, putative | 513 | 4e-050 |
| B9SXU8 Rac gtpase, putative | 512 | 5e-050 |
| A9T4W1 Rop-family small GTPase | 510 | 9e-050 |
| Q5PNX9 At4g35020 | 510 | 9e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G35020.1 ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase | 510 | 5e-052 |
| AT5G45970.1 ARAC2 (ARABIDOPSIS RAC-LIKE 2); GTP binding | 506 | 2e-051 |
| AT1G75840.1 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase | 504 | 3e-051 |
| AT1G20090.1 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding | 504 | 3e-051 |
| AT3G51300.1 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding | 496 | 2e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
