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Information for unigene UN23312
| FASTA Sequence |
| Unigene ID: UN23312 | Length: 849 |
| SNP | ACTAGGAACCTGTTCTATCATCAGCAGAATGTACAGAGGTATGTATGTAGTTTACATCAATCAACGGACAATGGCTTTGCAGCTCA
ATTCAAAATGTTAACAATATATTTAAAGCCAAACCATACAGACAAGACTTGCACTAGCAGTTCACATAAAGCCAAACAGATCGTGC
GTGGCAACTCGACGAAGGTGCTCTCACTGGCTGAGCCGTGCCTCTCTTTTAAGCACCTCATCAGCAAACTTGATCAAAATGGTAGT
CCGAGGACGTTGTTGTCCTTCAATGGGTACGAAATGAGCCGTTACCACAGCAGGAAACCCTGCGTTATCCAGAACTCCCTTCACTA
TGCCGGCCACAAACGCTCCGCAGTTGAATGTTCCCATGTCTTTTGGAATCGAAATGAACCTGTTGACGAGAAGCTCTTTTTCACTG
ATCATGTACTCATCTTCATGTTCTGTTCCTTTTTCAAGTGAATCAGCAACCTTTCCAAACAACACCTTCCACACGGTGCTGTGGAC
GAAAGACAGGATCCCTAGTAACCTTGTCTCTCTTCTGTTTCCCTTCTCTCGGTTGCAAAGAAGCTCCAAAACTCGAGATCCAACAG
CATAACCAGCATCCTCTAGTCTTCTTTCAAGCTCAGCAATGTTGTCAACCTGGGTTTGATTGTACTGAACCAGCTCTGAGAATAAG
AAAGCAAACGCGCTCAAGCTCACCTCTTGTTTGCCTTTGCTGAGTGGCTTGTCAAGGACATTAGAGTACTGCTTCATTTTCCCCAC
TCCGATCATCTTCTTCGCTTTTCAGAACCCTAGACACACAATCTTTCTTACCTTTCTCTCTCTGAGGAAATTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200611 Transport protein particle (TRAPP) component [Arabidopsis thaliana] | 980 | 4e-104 |
| XP_002866245 transport protein particle component Bet3 family protein [Arabidopsis lyrata subsp. lyrata] | 976 | 1e-103 |
| XP_002523497 Transport protein particle subunit trs31, putative [Ricinus communis] | 941 | 1e-099 |
| XP_002308390 predicted protein [Populus trichocarpa] | 937 | 4e-099 |
| XP_002279200 PREDICTED: hypothetical protein [Vitis vinifera] | 936 | 5e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54YG5 Trafficking protein particle complex subunit 5 | 589 | 4e-060 |
| Q9P7N9 Transport protein particle subunit trs31 | 449 | 7e-044 |
| Q5F359 Trafficking protein particle complex subunit 5 | 427 | 3e-041 |
| Q8IUR0 Trafficking protein particle complex subunit 5 | 427 | 3e-041 |
| Q2NL13 Trafficking protein particle complex subunit 5 | 426 | 3e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FGU1 At5g58030 | 980 | 3e-104 |
| B9SBX8 Transport protein particle subunit trs31, putative | 941 | 1e-099 |
| A9PAN6 Predicted protein | 937 | 3e-099 |
| B4FGI9 Putative uncharacterized protein | 930 | 2e-098 |
| C5Z4G5 Putative uncharacterized protein Sb10g004090 | 929 | 2e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58030.1 transport protein particle (TRAPP) component Bet3 family protein | 981 | 1e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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