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Information for unigene UN23357
| FASTA Sequence |
| Unigene ID: UN23357 | Length: 1352 |
SSR | | AATGTAAAACTTCCATTATTACATACTTATAAACTGATCATCATATCACTTTTCTTTAGCATTCGATGCTACAAGGATAACGACAC
CCCAAGGCTATATTTTACATTAAAACTGAAACAAATTGACGATAATACTAAAAATAACAGTCCATAGTTGTTATTCAGATACATAT
ATATATATAATATACACACAAGGACAGGTAAAACCCAGTAGTGTCCTAATACTTCTACTGAGTTGAGGTGTGAACAGCAGCAACAG
TAGATACCATTGTGTCCATACCACAGATGTTATGACGTCCCCTGCAGATTTGTAGTAACCATGCTCGCCCCACGTCTCTCCCCATG
AGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAGACGGATTGGTGCATAACCGGACGAGCCAAACCCAACCAAGAGCACTCCATGG
TCTTGGCTCTTAGAACATACATACGGGCACGAGACTCCGCCAATGTAAGTTTGCATCCACATTGCATTGATAGCAATGGCAAGAGG
ACCGTGGTGGACTAGATTTGCAGCTATTTGGTCTTCATCAGCAGAGACAACGCTGAAGTTAGACACTCTGGCAGCGATCATGCTCT
TGTCGAACTTGCAACCGGAATTGTCATGTCCTGTATAAGGATAGTCTGATTCTTTCATAAGGCCACCAGCTTTGAGAGTGTACTCA
AAAGCGTTGTTCATTAGTCCTCCACTGCATCCAGAGTCACATGAATTGGCCTCTTCTGGATCACACTCATGGTCGCAATCCACAAG
CTGCTGCTCACTGAGGCTAACAAGCTCTTTAGTCGCCAGAAAATGTGCTCCTTCAAGAGCTCCTGTTGCGCTAAACGACCAGCACG
ATCCGCACGAACCCTGGTTTTTAACGGGAGTGACGGCTCCTTGGTCACGCCAATCGAAATCCGTCGGGAGGTCGCTAGTCGGAAGG
ATCGGCGCCTTCTGAGCGTCTTTGGGAAGACGCAACCTCCGTTTCAGGCCTAGGTGCTTGCGGCGGAACTCCTTCGGAGTAAGATC
TGAGAATTGCGTCACGCCGTGGACGGCCGACGGATCGAGCAGCTGGTGACGCCTAGCTCTACGCAGATTAGCCTCGAAGACGCGGA
AACGACGATCGTGCTCCGCCTGAGTCGCGTAGGTCTTGTCGTACTTGGACTTGAAGAGAGAGAAGTGGTGCTCCGCGTTGAGCAGC
TGCTCATCGTTTTCTTCCGGGACGACTTGCCTGATGATCGGGTTATCGAAACCGTCTTCTGATACGTGGCCCGTGATGGCGACGAG
TAGAGTGGCTGCTGTGAGGAGGAAGAAGATTACACGATTCATTTTGTTTTTCCAAGAGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567489 Papain family cysteine protease [Arabidopsis thaliana] | 1572 | 2e-172 |
| XP_002870174 hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp. lyrata] | 1569 | 4e-172 |
| XP_002306900 predicted protein [Populus trichocarpa] | 1403 | 8e-153 |
| ABK94746 unknown [Populus trichocarpa] | 1386 | 7e-151 |
| XP_002302004 predicted protein [Populus trichocarpa] | 1385 | 1e-150 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P43296 Cysteine proteinase RD19a | 1312 | 1e-143 |
| P25804 Cysteine proteinase 15A | 1279 | 8e-140 |
| P43295 Probable cysteine proteinase A494 | 1261 | 1e-137 |
| Q10716 Cysteine proteinase 1 | 1174 | 1e-127 |
| P04988 Cysteine proteinase 1 | 663 | 2e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SUL1 AT4g16190/dl4135w | 1572 | 1e-172 |
| A9P971 Predicted protein | 1403 | 5e-153 |
| A9PEE3 Putative uncharacterized protein | 1386 | 5e-151 |
| B9GRH2 Predicted protein | 1385 | 7e-151 |
| A9PJM7 Putative uncharacterized protein | 1384 | 9e-151 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16190.1 cysteine proteinase, putative | 1572 | 7e-175 |
| AT4G39090.1 RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase | 1312 | 1e-144 |
| AT2G21430.1 cysteine proteinase A494, putative / thiol protease, putative | 1261 | 9e-139 |
| AT3G54940.2 cysteine-type endopeptidase/ cysteine-type peptidase | 962 | 4e-104 |
| AT3G19400.1 cysteine proteinase, putative | 521 | 6e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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