 |
Information for unigene UN23371
| FASTA Sequence |
| Unigene ID: UN23371 | Length: 1325 |
| SNP | TAGTTTCCAAAACGTGTCCTCTCTTTCTTCTTCCCCCATTGCTCTCCAAACCGAGAAAGAAAATGCTGACTCTACTCTTCTCCTCT
CTCGGACTCCTCCTTCTTCTCGGTCTTCTCCTCAAATTCGCATTTGCCGACGGGGATTTAACTCTGATCTCGAAGAAGCATGTGAA
GCGAGAAGCCATAGAAGGCAAGGTGGTTTGGATCACAGGGGCTAGCCGTGGAATTGGGGAAGTTCTTGCTAAACAGTTTGCAAGTT
TAGGTGCCAAGCTTATTCTCTCTGCCAGGAACGAAGCTGAGTTGTTTCGTGTTAAGAGTGAGCTCAAAGGTAAGTATGCACCAGAA
GATGTCAAGGTTTTGCCTTTAGATCTAGCTAGCGGCGAAGAGGGGCTCAAACATGTTGTAGAGCAAGCGGTGTCGCTTTTCCCTGG
GGCTGGTGTTGATTATTTGGTTCACAACGCTGCCTATGAGCGTCCGAAATCAAATGCAGTGGATGCCAGCGAGGAAAATCTTAAGA
CTACATTCGAGGTTAATGTATTTGGGACCATATCTCTCACAAAGTTGGTAACTCCTCATATGCTGAAACAAGGAGGCGGTCATTTT
GTTGTGATTAGCAGTGCCGCAGGGAAGGTACCATCACCTGGACAGGCTATATATGCCGCTTCAAAACATGCTCTGCAGGGCTACTT
CCACAGCTTACGTTCTGAGTTCTTTCAGAAGGGAATCAAGGTTACTGTTGTTTGTCCCGGTCCAATAGAGACCTCAAATGGTACAG
GAACATCAACTTCGGAAGACAAGAAGTCTCCTGAGAAGCGTGTGTCATCTGAACGATGTGCAGAACTGACCATAATCGCTGCATCT
CATAACTTAAAAGAAGCTTGGATTTCATATCAGCCAGTACTGCTGGTGATGTATCTAGTGCAGTACATGCCTTTCCTTGGCTTCTG
GCTCATGGACAAGGTTGGAGGGAAACGTGTGGAGGTTGCTGAGAAGAAAGGCAACACATACTCATGGAATTTGCTCTTCCAGAAGA
AGACTAAAACAAACTGAAAGTGATCATCTAGAAAGTGTCTTTTGATAATAATGAGTTCTGAAGTCTTGTCAGTAGTTGTGGTTCGT
GTTTGTGCTCAGCAAGACAGTTTGTTGCCTTGTTAATTACCAGCAGGATAAGTTGGATTTTCTAGGCATTGGTTGTAAGAGTTGTT
TCGTAGTTTACTGTGATGTTTAGTGAGATATAAGAACTGTTACTTCCTGAGTGGAATTCTTCATGAAGAAACTAACTATCAGAACT
TGCTGTTGAGTGGTAAAAGAGTTCAAAACTTTTTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_186983 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | 1519 | 3e-166 |
| XP_002884371 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1511 | 2e-165 |
| XP_002328993 predicted protein [Populus trichocarpa] | 1175 | 2e-126 |
| XP_002276273 PREDICTED: hypothetical protein [Vitis vinifera] | 1142 | 1e-122 |
| XP_002514813 short-chain dehydrogenase, putative [Ricinus communis] | 1141 | 2e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9Y394 Dehydrogenase/reductase SDR family member 7 | 516 | 2e-051 |
| Q9Y140 Dehydrogenase/reductase SDR family protein 7-like | 364 | 1e-033 |
| Q7Q732 Dehydrogenase/reductase SDR family protein 7-like | 319 | 2e-028 |
| Q566S6 Dehydrogenase/reductase SDR family member 7B | 303 | 1e-026 |
| Q5R6U1 Dehydrogenase/reductase SDR family member 7B | 302 | 2e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7U0 AT3g03330/T21P5_25 | 1519 | 2e-166 |
| B9N132 Predicted protein | 1175 | 1e-126 |
| B9RM44 Short-chain dehydrogenase, putative | 1141 | 1e-122 |
| C6TBI2 Putative uncharacterized protein | 1128 | 4e-121 |
| Q9SRN7 T21P5.25 protein | 1124 | 1e-120 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G03330.1 short-chain dehydrogenase/reductase (SDR) family protein | 1520 | 8e-169 |
| AT3G03350.1 binding / catalytic/ oxidoreductase | 512 | 6e-052 |
| AT3G47350.1 short-chain dehydrogenase/reductase (SDR) family protein | 261 | 8e-023 |
| AT3G47350.2 short-chain dehydrogenase/reductase (SDR) family protein | 261 | 8e-023 |
| AT5G50590.1 AtHSD4 (hydroxysteroid dehydrogenase 4); binding / catalytic/ oxidoreductase | 237 | 5e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
