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Information for unigene UN23385
| FASTA Sequence |
| Unigene ID: UN23385 | Length: 1282 |
| SNP | GGAGGGTTTTATTCGTGTCGTAGCTTCCTTCCTTCTCCTTCGTTTGTTTATCGTCACTGCAACTTTCTCATCTTGATTAAAAAAAA
AGACTAGAAAAGAAGAAAGAGGATGAGGCCGATACTGATGAAGGGACACGAACGTCCATTGACGTTCCTCAGGTACAACAGAGATG
GAGACATGCTCTTCTCCTGCGCCAAGGATCACACTCCCACTCTCTGGTACGCCGATAACGGCGAACGCCATGGAACCTTCCGTGGT
CACAACGGTGCCGTTTGGTGCTGCGATGTCTCAAGGGACTCGTTGACGTTGATAACCGGAAGTGCTGATCAGACTGCGAAGCTGTG
GGATGTGAAAACCGGACAACAGTTGTTCAGTTTCAAGTTTGGTTCTCCCGCGAGGTCTGTTGATTTTTCTCTTGGAGATAAGCTTG
CGGTTATCACCACTGATCCCTTCATGGAGCGTACTTCTGCTATTCATGTCAAACGCATCGCTGAAGATCCTGCAGACCAGGTTAGT
GAGTCTGTGCTTGTCCTTGAGAGCCCTAATGGGAGGAAGAGGATAAACAGAGCTGTTTGGGGACCATTGAACCAGACCATTGTTAG
TGGTGGTGAAGATGCTGTGCTCAGGATCTGGGATGCTGAGACTGGAAAATTGCTCAAGGAGTCAGATGCGGAAGTGGGGCATAAGA
ACACAATCACGTCGCTCACTAAAGCAGCTGATGATTCTCACTTCATTACTGGTTCACTTGACAAGACTGCAAAGCTGTGGGACATG
AGGACGTTGACTCTTCTCAAGACTTACGTTTCAGGGGTGCCTGTAAATGCCGTCTCCATGTCTCCCCTTCTTGACCATGTTGTGCT
TGGTGGTGGTCAAGATGCATCAGCTGTTACAACCACTGATCATCGTGCTGGGAAGTTCGAGGCTAAGTTTTATGACAAGATTCTGC
AAGAGGAGATTGGTGGTGTGAAAGGTCATTTTGGACCTATAAATGCTTTGGCATTCAACCCTGATGGAAAGAGTTTCTCAAGTGGA
GGTGAAGATGGATACGTCAGATTGCATCACTTTGACTCTGATTACTTCAACATCAGGATTTAGATCCTTTTTTACAACAAGTCTCT
TAATCCGCATTTTGTTTCTGTCTCTTTTCTGGATTATAAATGTTGTTTTTCCCTACTATCAATACTTTAATGGTGCTGAGATATGA
AGTGTTTGAATTTTGGATCGAATCCTTAGATTTTGTACATTTCATACTTTTTGAATTACAAGTTACAAACCTGCGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182151 translation initiation factor 3 subunit I [Arabidopsis thaliana] | 1539 | 1e-168 |
| XP_002882056 TGF-beta receptor interacting protein 1 [Arabidopsis lyrata subsp. lyrata] | 1538 | 2e-168 |
| AAK43862 eukaryotic translation initiation factor 3 delta subunit [Arabidopsis thaliana] | 1535 | 4e-168 |
| BAH19940 AT2G46280 [Arabidopsis thaliana] | 1525 | 5e-167 |
| NP_182152 translation initiation factor eIF-3 subunit 2 [Arabidopsis thaliana] | 1521 | 2e-166 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38884 Eukaryotic translation initiation factor 3 subunit I | 1539 | 5e-170 |
| O02195 Eukaryotic translation initiation factor 3 subunit I | 778 | 9e-082 |
| B4I195 Eukaryotic translation initiation factor 3 subunit I | 778 | 9e-082 |
| B4Q354 Eukaryotic translation initiation factor 3 subunit I | 778 | 9e-082 |
| B3N4C7 Eukaryotic translation initiation factor 3 subunit I | 774 | 3e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WVZ3 Eukaryotic translation initiation factor 3 delta subunit | 1539 | 8e-169 |
| B9DGS3 AT2G46280 protein | 1525 | 4e-167 |
| O82341 Eukaryotic translation initiation factor 3 delta subunit | 1516 | 4e-166 |
| Q8GWC2 Putative eukaryotic translation initiation factor 3 delta subunit | 1514 | 7e-166 |
| B9S7C0 Eukaryotic translation initiation factor 3 subunit, putative | 1496 | 8e-164 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46280.1 TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding | 1540 | 4e-171 |
| AT2G46280.2 TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding | 1540 | 4e-171 |
| AT2G46290.1 eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative | 1522 | 4e-169 |
| AT2G46280.3 TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding | 1120 | 2e-122 |
| AT1G15470.1 transducin family protein / WD-40 repeat family protein | 200 | 9e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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