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Information for unigene UN23388

FASTA Sequence
Unigene ID: UN23388Length: 1642 SSRSNP
TTTTGACAGTAAATCATCATTTTAATGCGTATAACTGACGTCCGACAAAAGCACCGTCAAAACATAATGTTCTGTCAAAAGGCTGA
AACAGATCCAAAAGAAGAAAAAAAAGCACTTGAGAGTAATCTTCTACTACACTTTACTACCGATGAAACAATACTAGTTTTCAAAA
CCTAAGAAAGGTCAGCGAGGGCCTTATCGATACCCTCTGCGTGGTTCCGAAGAGTGTTCCACTGATCCACGCTTAGAGAGATACCT
TTCTTGCCAGGCAAAGTTTTACCGTCCTTGACATAAAAATCACGTATGTCAATCCAAATTTTACCGTTCCAATTCCTCACAGAGAC
TCTCCTGTTCTTAGATATATTGCAGACGACGATGTCGTCAGATTCGTCGGAGGATTCGGCTGGCTTTGAGAGTTTCTTAGCCGGAG
CGTGGGTTTCAGATTCGTCATCTGATGCTCGGACATCATCGTCTTTTCTTTTTCCTCTCCACGACATTTTTTTTTCTCGAGCAAGT
AACCTGTTAAAAAAAAAAGCTCTCTAGTCGGGACGCTGCAGCGGTAGAGAAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTTTACGCTTCACCGCCGACCATGGCGAAAGAGAAACTGAAGCCTCTTCCCACCTCTGACGGAGGTGAAATC
GCCGACACTACTCCTAGAGAGAAGAAGCATAAGAAGAAGAACAGGAAGCGATCTGAACCCGATCCCGATGTGCCTTCAACAACAAG
AGAGCCGCGTCATTCCGGTGTTGACGAAGAAAGGGATGGAGGGGTAGTAGAGGATGCTCATAACGAGCCAACAATGGGTGATAAAT
TCGAGAGTCTTCATTTGTTAGAGGGAGAGAAACTTAGAAGCGAGGAGGAGAGTAATAGAGTCGATGATAAGAAGCCTCCTACAGCA
GCCTCTGTGAACGTTCTTCTGAGACAGGCATTGCATGCTGATGATCGCTCTCTTCTACTTGATTGCTTGTACAACCGAGATGAACA
GGTGATTGCTAATTCGGTTGCTAAGTTGAATTCAGCAGAAGTTCTAAAGCTTCTTAATTCCCTTCTACCAATACTACAATCAAGGG
GTGCGGTTTTAGCTTGTGCGATTCCGTGGATAAAGTGTGTGTTACTTACTCATTCCAGTGGGATTATGTCCCAAAACTCATCTTTG
ATCGCTTTGAACTCAATGTATCAGCTCATCGAATCACGAGTATCAACTCTTCACACTGCCGTAGAAGTTTCAAGCGGCTTAGACTT
GCTTGTGGACGATTTGGATGAAGAAGAAGAAGATGAAGGTCCAGTGATTTACGAGGACAAGGACACTGATGATGAAGAAGGACAAG
GACCAGATGAAGCAATGGAAACAGATGAAGATGGAGACGAATCAGCGGATGAAGCAGCTGATGGTGTCAATGCTTTTGAGGATTTT
GACGACATGAGCGATTGAGAAGACTCCCCCGACAACATAGAAAGTTTTGATTTTGTGAGTGCTGTTTGGTCGTTACATGTTCATGT
CGTCTCCGAATTCTCTATTAAGTAATGGTTGATTGATTATTAGACTTTGTACTGAAAAAGAGGTTTATTTTTTACATTAAAAAAGG
TTGACGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892867 hypothetical protein ARALYDRAFT_471743 [Arabidopsis lyrata subsp. lyrata]11082e-118
NP_849671 uncharacterized protein [Arabidopsis thaliana]10785e-115
XP_002517583 conserved hypothetical protein [Ricinus communis]6573e-066
XP_002281427 PREDICTED: hypothetical protein [Vitis vinifera]5982e-059
XP_002304157 predicted protein [Populus trichocarpa]5491e-053

Swiss-Prot top hits (Blast detail)Scoree value
O65154 RNA polymerase II transcriptional coactivator KIWI5137e-051
Q6ZQL4 WD repeat-containing protein 432082e-015
Q15061 WD repeat-containing protein 431785e-012
O65155 RNA polymerase II transcriptional coactivator KELP1751e-011
Q75JC9 Uncharacterized protein DDB_G02716701679e-011

TrEMBL top hits (Blast detail)Scoree value
Q8L403 Putative uncharacterized protein10783e-115
B9RV14 Putative uncharacterized protein6572e-066
B9GWD9 Predicted protein (Fragment)5497e-054
Q0WS63 Putative transcriptional co-activator5131e-049
Q9XI26 F9L1.385102e-049

Arabidopsis top hits (Blast detail)Scoree value
AT1G15420.1 unknown protein10844e-118
AT5G09250.1 KIWI; DNA binding / protein binding / transcription coactivator5145e-052
AT5G09250.2 KIWI; DNA binding / protein binding / transcription coactivator3953e-038
AT5G09240.1 transcriptional coactivator p15 (PC4) family protein3667e-035
AT5G09240.2 transcriptional coactivator p15 (PC4) family protein2904e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  5%
 
83  15%
 
1210  50%
 
114  20%
 
62  10%

Unigene MembersMember information