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Information for unigene UN23398

FASTA Sequence
Unigene ID: UN23398Length: 2332  SNP
GGGTCTTCCTTTTGGTTCAAAAGCCATACATAGATCGATCTCTCACGCCTTCCCCAAACCTCAGTCTCCGTTGACTACTGAGACTC
GCCAAACTGCTGTGATGATGGCTGGAAGTCTCGTGCGATCCCTAGTTTTGATTCTCGCCGTAGCAATCTGCGGTGCTGCTTCAGTG
TCTCAGCCCATCTCAGACTCTCACCGATCCGCAGCTCTCGATGTCTTCCTACCACTCGATGGATCCTACAAAAGCTTGGAGGAGGC
TTATGAAGCATTGAAGACTTTGGAGATTCTTGGGATTGATAAGAAGTCTGATCTAAGCTCTGCTACTTGTGAGAATGTGGTTAAAG
TTCTTGCCTCGCCTTCTTCTACTCCTAATGATGCATTCTATGCTTTGAGCGTTAATGGGATTCTCAAATGCAAATCTGGAGAAGAT
GTTCCTAAGGACATTGTCTCTAAACTTCAAGCTGGAGTTAAAGATGCCAAGTTATTGCTTGACTTCTACTATTCTATCAGAGGATT
GGTGCTGGTTAAGGAGCAATTTTCTGGAACTGATCTAAGTCTTGGAGATGCTGAAGCTGTTTTCCGTTCCATTAAGGCTCTTAGCC
GGAGTGATGGAAGATGGTGGTACAGCTCCAACAATCCGGAATCAAGCACCTTTGCTGCTGGATTAGCTTTCGAAACGCTTGCTGGA
GTTATTTCATTAGCACCTTCAGAGATTGATCAATCATTGATCCAGACATCGAAGACGGGTATCCTGAAGGTTTTTGACAATATCCG
AAAATATGATGATGGGACTTTTTACTTCGATGATGCGAAGGCCCGATCTCAACAACTGCATCAGTAATTAGAGGGCTCACGTCACT
TGCAGCTTCAGATTCCACAGGATTGAACCTTCCAGGTGATAAGATAGTTGGTTTGGCCAAGTTCTTTCTTGGTGTTGGAATTCCTG
GTGATGCCAAAGATTTCTTCAACCAAATAGATGCCTTAGCTTGTTTGGAAGACAACAGGTTCTCTGTTCCACTGATCTTGTCTCTT
CCATCTACTGTCATTTCATTGACAAAGAAAGAGCCTCTGAAGGTTAAAGTTGGCACTGTACTCGGTTCTAAGGCACCAGCTCTTAG
TGTGAAGCTCGTACAAGCTCTAAGTTCTGGATCAAAGGGTTCTTCTGTAATTAACAACCAGGAGCTTAAGTTCGACGCTGTCAGCG
CAACATACTTTTTGGACTCCTTTCCCAAGAACTTTGATGTTGGAAAGTATACGTTTGTATTTGAGATTTTGTTAGATGAGTCGGCA
AATGAAAAAGCATACGTAACCGAAGCTCAAACAAAAGTGCCTGTAGCCGCCACAGGAGCTATCACCATTGAGGATGCAGAAATTGC
TGTACTTGACAGTGACGTTGGGAGCGTTGAATCCCAGAAAAAGCTAGATTTAACTAAAGATGGAGCAGTATCATTATCAGCAAACC
ATCTCCAAAAGCTGCGCCTGTCGCTCCAGTTAACTACTCCACTTGGCCATGTGTTTAAGCCACACCAGGCATTTCTCAAGCTGAAA
CATGAGTCACAGGTCGAGCATATCTTTCTCGTGAAAACTTCTGGAAAGAAGTCTGAATTAGTTCTAGATTTTCTTGGATTGGTTGA
AAAGCTCTACTACCTTTCTGGCAAATATGAGATCCAGTTAACTATTGGAGATGCTTCCATGGAAAACTCTTTATTGAGTAATATTG
GCCACATCGAACTAGACCTACCACAACGTCCAGAGAAGGCGGCTAGTCCTCCTCTACAGCCTACTGATCCTTACTCAAGATATGGG
CCAAAAGCTGAGATATCACACATCTTCAGGGTTCCAGAAAAGCTTCCAGCGAAGCAGCTTTCACTAATTTTCTTGGGTCTTATAGT
TCTTCCATTCATCGGCTTCTTGATTGGGCTTACGCGGTTGGGAGTGAACATAAAGAGCTTCCCATCATCGGTTGGAGCTGCAACAT
CCGCTTTACTTTTCCATGGCGGCATTGGAGCTGTTCTGCTTCTCTATGTGCTCTTCTGGGTGAAGTTGGATCTGTTCACGACTCTA
AAGGCACTGTCATTGTTGGGAGTATTTCTGTTGTTCGTTGGACACAGAACACTGTCTCACCTCGCAGCAGCATCGAACAAGCTGAA
ATCTGCTTGAAGAATATATATTGTCAGTATGATGGATCTTCTATGGGTTCCTGTGTCTCTGTGGAGCAGTTTCGTATTTCAGTTTT
GTAGCAGTAACTTATATAGATTATGGTAATAAGACAATTCCAAAAGATTACAGAGTTTCAGTTTAGTCTTAAGAGTTACCAAGAAG
AGTTGCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193847 ribophorin II (RPN2) family protein [Arabidopsis thaliana]20582e-228
XP_002869904 ribophorin II family protein [Arabidopsis lyrata subsp. lyrata]20563e-228
CAA17534 putative protein [Arabidopsis thaliana]17831e-196
XP_002272576 PREDICTED: hypothetical protein [Vitis vinifera]16021e-175
CBI37135 unnamed protein product [Vitis vinifera]16021e-175

Swiss-Prot top hits (Blast detail)Scoree value
P04844 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 23444e-031
Q9DBG6 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 23355e-030
Q5RBM1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 23338e-030
Q3SZI6 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 23302e-029
P25235 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 23302e-029

TrEMBL top hits (Blast detail)Scoree value
Q93Z16 AT4g21150/F7J7_9020581e-228
O49556 Putative uncharacterized protein AT4g2115017839e-197
B9H8P2 Predicted protein15599e-171
B9SV32 Ribophorin II, putative15042e-164
B9GRP4 Predicted protein15006e-164

Arabidopsis top hits (Blast detail)Scoree value
AT4G21150.1 HAP6 (HAPLESS 6); dolichyl-diphosphooligosaccharide-protein glycotransferase20595e-231

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  24%
 
91  6%
 
116  35%
 
82  12%
 
104  24%

Unigene MembersMember information