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Information for unigene UN23406

FASTA Sequence
Unigene ID: UN23406Length: 1605  SNP
GGACATTTTCCAATAGCTTTCTTATCGAAGTCTCTCACAGAATAAACCCAAAAATTAAGAACACCATGAATGCTTTGGCAGCAACC
AACAGAAACTTCAAGCTAGCTTCTAGGCTGCTTGGTTTGGACTCAAAGCTTGAGAAAAGTCTTCTCATTCCCTTCAGAGAAATCAA
GGTGGAATGTACCATACCGAAAGATGATGGAACTCTAGCATCATTCATTGGATTCAGAGTCCAACATGATAACGCAAGAGGTCCCA
TGAAAGGTGGCATCAGATATCATCCAGAGGTAGAACCGGATGAAGTAAACGCTTTGGCTCAACTCATGACATGGAAAACCGCAGTG
GCTAAGATACCTTATGGTGGAGCCAAAGGAGGTATTGGTTGTGACCCGAGCGAGTTAAGCATCTCAGAGCTTGAACGTTTGACTCG
AGTTTTCACACAGAAGATCCATGATCTAATTGGGATTCATACCGATGTTCCAGCTCCTGATATGGGAACCGGTCCTCAGACAATGG
CGTGGATGCTTGATGAATACTCCAAGTTCCATGGACACTCTCCTGCTGTTGTGACAGGAAAACCCATTGATCTTGGTGGATCTCTG
GGGAGAGATGCTGCTACCGGAAGAGGAGTGCTGTTTGCAACAGAAGCTTTACTCAATGAACATGGAAAGAGCATATCTGGACAGAG
ATTCGTCATCCAGGGTTTTGGAAATGTGGGTTCTTGGGCGGCAAAGTTAATAAATGAAAAAGGTGGGAAGATAGTGGCAGTGAGCG
ATGTCACAGGAGCTATCAAGAACAAGAACGGTATCGATATCTCTGGTTTGCTCGAGCATTCTGAAGAAAACAGAGGAATCAAAGGG
TTTGATGGTGCTGATTCTATCGATCCTGATTCGATTCTTGTTGAAGATTGTGATGTCCTGATCCCTGCAGCTCTAGGAGGTGTCAT
CAACAGGGGAAATGCAAATGAGATTAAAGCAAAGTTTATAATTGAAGGTGCTAATCATCCAACTGATCCTGAGGCTGACGAGATAT
TGAGGAAGAAAGGTGTTGTGATCCTCCCAGACATATACGCAAACTCTGGAGGAGTTACTGTAAGTTACTTCGAGTGGGTTCAGAAC
ATACAAGGATTCATGTGGGATGAGGAAAAGGTGAACAAGGAGCTACAAAATTATATGACTCGAGGCTTCAAAGACTTGAAAGAGAT
GTGCAAGACACACTCTTGTGATCTCCGTATGGGAGCTTTCACCCTCGGTGTCAACCGTGTGGCTCAAGCTACCGTTATCAGAGGTT
GGGGATCTTAAAATATTCATGCAACTTCAATAACAATAACTCATATAATCCCTTCTGTTTCATGCAAGTTCATTCACAATAATAAA
ATTGCAATGTAATCTTTCAATTTTTCTATCAATAGAAGCTAATTAGAAGCAATTTTTCTACTCCATTGATTAAACCAAAGTTGATA
ATGTGGGAAAACAAAGTTTCATTGATAACATTGCAAATAGAATATCACCAATTTGTAAAATGATTGCAAGAAATATATAATAAAAG
CAAAAATATGATGTATTATGCCCTTTTACAAAAAAAAAGATGTATTATCGTTAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882318 hypothetical protein ARALYDRAFT_896411 [Arabidopsis lyrata subsp. lyrata]20742e-230
NP_187041 glutamate dehydrogenase (NAD(P)+) [Arabidopsis thaliana]20688e-230
NP_197318 glutamate dehydrogenase 1 [Arabidopsis thaliana]20122e-223
XP_002871806 hypothetical protein ARALYDRAFT_488683 [Arabidopsis lyrata subsp. lyrata]20095e-223
XP_002525427 glutamate dehydrogenase, putative [Ricinus communis]19844e-220

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7A0 Probable glutamate dehydrogenase 320683e-231
Q43314 Glutamate dehydrogenase 120121e-224
Q9LEC8 Glutamate dehydrogenase B19456e-217
P93541 Glutamate dehydrogenase18982e-211
Q43260 Glutamate dehydrogenase18596e-207

TrEMBL top hits (Blast detail)Scoree value
Q1H5A3 At5g1817020122e-223
B9SHF8 Glutamate dehydrogenase, putative19843e-220
Q5F2M9 Glutamate dehydrogenase 119673e-218
C6TDZ0 Putative uncharacterized protein19621e-217
B9I5Y2 Predicted protein19549e-217

Arabidopsis top hits (Blast detail)Scoree value
AT3G03910.1 GDH3 (GLUTAMATE DEHYDROGENASE 3); binding / catalytic/ oxidoreductase/ oxidoreductase, acting on the CH-NH2 group of donors, NAD or NADP as acceptor20692e-232
AT5G18170.1 GDH1 (GLUTAMATE DEHYDROGENASE 1); ATP binding / glutamate dehydrogenase [NAD(P)+]/ oxidoreductase20137e-226
AT5G07440.1 GDH2 (GLUTAMATE DEHYDROGENASE 2); ATP binding / glutamate dehydrogenase [NAD(P)+]/ glutamate dehydrogenase/ oxidoreductase17896e-200
AT5G07440.2 GDH2 (GLUTAMATE DEHYDROGENASE 2); ATP binding / glutamate dehydrogenase [NAD(P)+]/ glutamate dehydrogenase/ oxidoreductase17896e-200
AT5G07440.3 GDH2 (GLUTAMATE DEHYDROGENASE 2); ATP binding / glutamate dehydrogenase [NAD(P)+]/ glutamate dehydrogenase/ oxidoreductase12888e-142

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
911  65%
 
112  12%
 
82  12%
 
102  12%

Unigene MembersMember information