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Information for unigene UN23412
| FASTA Sequence |
| Unigene ID: UN23412 | Length: 1943 |
| SNP | CCCACAAGCTCAAAACATTTCTTTTAAATATCAGCGCAATTATATTTTTCACAAGATGTGATCCTTTTTCATAATGGTAACAAATA
CTGTATAATTTTTATTATGAACACAGACAGAGAAGATGTGAAATAATGACAAGCAACTCTGTTCCGGCAAAGATATTTCAGCATGT
CGTTCTATTCAATGGCTGCTTCTTCCGAGACGGATGTGACATCAGACAAGATGTCTGCGTCATTGTCTTCTTCGATGGTTAGACTC
GACACTTCTTCGTTTAAGGAAGAGACATCGTCTTCTCCAGTGACAGATGGAGCTGGTGAAGCATCAGTGCTCGTGCACGTCGTGGT
TGTGCTATGCGTCGATGATGTATCAGAACTTGAACTCTCTGACGATGATGACTTTTGCTGAAGACTCCAATACATTATACTTGCCG
TTAAGATCAACATCATCTTTTGATTTACGTCCACGATATCTTCTGGTAACAAGAAAACAGAGCAACCGAGCTTTCTTGCTACACTG
ACGATGTATGTAGCATTCAATCTCTTCTCGTCCTCTGCTTGACCCTTGGTGACAAGATTCCAGTTAACAACTCTTGGCTCAACCGC
CCATAGAAGATCTAGGAAGAACAATCCGCTAGATAGACTCTTATCCTTGAAGCTTTCAATCTGTGATTTACGTCCCATGATTTTGA
CTTTCCTGTTTGCCCAGCTCAGGATTTCTGCGTCAGTCATGTCTTTGCCTCGCGTCCGAGATCGAAGATTCTTGAGAAGTTGGAGC
ATATGGGTTCTCATCAACTGCCATAAGAAGCCGAGGATAAGCTTCTTATTCCCTTGAACTATGTCATTTCCAGCTACATTTACGAG
CGAGAATCTCATCTCTTTCCCAATCCTCACAACTTGATTGCAGTTCTCTACTTTCTTAACGGCATCTTAATTGGTGGTTTTGAAGC
ATGCTTCCAGTTAACTGAGCCTGGATAGACCTTGTCAAGAACTTCAAGAAGAATCCATCTGCATCAAAAAATATTTAAGAAACATT
TCCTTTCCTAGAAACTTCCGGACCAGAACATCACTCTTGTCTTCACAGAAAGCTTACCCGTTTCTGACGTCTTCAAACACATTATT
GACATAACTATCAATCCCCAGGCTGTTAATCCATAGCCGGTAACATCTTTCATCTCTGCAACTCTGCGGATCCTCAGTCATCATCT
CCGCAAAGGAGTACCTGCCATCAGTGCTAAGGCCATTCCTGCAGCAAGGTACAGAGAAGCTAGTGTAAAGATCAAGTGAGTTAAGA
CCAAAACTATTATCTTCTGTGATCTTTTACAAACCTTTCGTGAAAAATCTGTGCCACAAATGCGAGATTCAGATACGAAGACCCCT
CAACTATCTCTTCAGCAGTCAAGTACCGTTTGCAGTTCATTCTCTCAGCGTGTTCAAGGACCATGTTAGCCCTTTCGAGATCATCC
TCGGCGTTTAGAGTAGCTGGATCACAGTGCTCAGGTGCAAGAACATTGAGAAGGAATGCATAGGCTCTTGCATCCTTCAGATCCGA
AGAAAAGTTTCCAGCGGTTTTCTTGTAGCCACCTTTCTTGAGATGGAAGTTCAACCATTTGAGTAAGACTTTCTCCGGGGGTAATC
TCAGAAACTCTTCAATATCGTCGTTGTCTTCCACCAACTCAATAAGCTGAGGCATCTTCTTCAAACTGAGATCAGCGAGGAGCTGG
ATCTTTATGAGTTGTGAGATCAATCCAAGCACAAGATGAGGTCGTCCTTCAGCGAGGTCCTGTGTCCCAATATTAACCACGCTGCA
GCCAACAGCTCTAGCGGAGTTGAGACAGAGCGTATGATTCTCATTTCTCTCCCACGGGTTAAGCACTCTCTTCGTGTTGATGGCTC
GCTCATCAATCGTCCCAGGAACTGCTATATTAATAAACTTACATAGAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866095 ATFIM1 [Arabidopsis lyrata subsp. lyrata] | 1072 | 3e-114 |
| NP_200351 putative fimbrin-like protein 3 [Arabidopsis thaliana] | 1069 | 7e-114 |
| XP_002869596 hypothetical protein ARALYDRAFT_913880 [Arabidopsis lyrata subsp. lyrata] | 983 | 6e-104 |
| 1PXY Chain A, Crystal Structure Of The Actin-Crosslinking Core Of Arabidopsis Fimbrin | 971 | 2e-102 |
| NP_194400 fimbrin 1 [Arabidopsis thaliana] | 968 | 3e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FJ70 Putative fimbrin-like protein 3 | 1069 | 3e-115 |
| Q7G188 Fimbrin-1 | 968 | 1e-103 |
| Q9FKI0 Fimbrin-like protein 2 | 758 | 3e-079 |
| Q14651 Plastin-1 | 517 | 3e-051 |
| P54680 Fimbrin | 505 | 7e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFJ1 AT4G26700 protein (Fragment) | 968 | 2e-102 |
| Q2V3E6 AT4G26700 protein | 968 | 2e-102 |
| B9RQ50 Fimbrin, putative | 891 | 2e-093 |
| B9GJV7 Predicted protein | 876 | 1e-091 |
| B9I148 Predicted protein | 869 | 7e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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