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Information for unigene UN23414
| FASTA Sequence |
| Unigene ID: UN23414 | Length: 796 |
| SNP | GGACGTCGAAACAACAACACGAAGACATCTCCACAAAGATTTTTTTTCCTTTTTCCATAGCTTCGATCTTCCTCCAATGTCTGTCA
ACGCTCCCATATCGTCTCACCCGAGAACACAGTTCCTCTCCAACCCCGTTCTCCCTCGCTTTCGTCGGTCATACTCCGCCGTGAAA
TCACCAGCAGCCTTCTCCGTCGTCTCAATGGCTCCCCAGAAAAAGGTGAACAAGTACGATGCCAAGTGGAAGAAACAATGGTACGG
AGCGGGACTATTCTTCGAAGGGAGCGAAGAAGTAAACGTCGACGTTTTCAAGAAGCTGGAGAAGCGAAAAGTACTAAGCAACGTTG
AGAAATCCGGCTTGCTCTCAAAAGCAGAAGACTTGGGAGTCACGTTGTCATCTCTTGAGAAGCTTGGTGTTTTCTCCAAAGCAGAG
GAGCTCGGTCTTCTCAGTCTCCTTGAGACTTTAGCCGGTACATCTCCTGCTGTCTTGGCCTCGGCTGCATTACCGGCTCTGACGGC
TGCTATTGTAGCCGTGGTGCTGATTCCTGATGACTCAACTACTCTGGTGGTTGCTCAAGCGGTTTTGGGCGGTGCTTTTGCTCTTG
GAGCTGTTGTTTTGTTGGTGGGTTCTGTTGTTTTGGATGGACTTCAAGAAGCTGATTGAGTTTTCCTCTGTAAACAAAACACAACT
AAAAACATTGCTGTACAATTGTTTTTTTTGTAATAAAGTTTCTATAGAAGGACTATAGCTTATTAAAGCCTTATTGACACAAAATG
AAAATAGTATCTGGTTCACCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AEI52297 hypothetical protein [Brassica napus] | 919 | 4e-097 |
| AEI52298 hypothetical protein [Brassica napus] | 917 | 8e-097 |
| AEI52299 hypothetical protein [Brassica napus] | 882 | 9e-093 |
| AEI52296 hypothetical protein [Brassica napus] | 881 | 1e-092 |
| AAD55273 Similar to gb|D86180 phosphoribosylanthranilate transferase from Pisum sativum and contains 2 PF|00168 C2 (phospholipid binding) domains. ESTs gb|H76726, gb|T45544 and gb|N96377 come from this gene [Arabidopsis thaliana] | 825 | 4e-086 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SSF7 F25A4.30 protein | 825 | 2e-086 |
| Q94F10 Putative uncharacterized protein | 813 | 6e-085 |
| A9PJV1 Putative uncharacterized protein | 611 | 2e-061 |
| B9I306 Predicted protein | 609 | 3e-061 |
| B9N497 Predicted protein (Fragment) | 599 | 4e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G74730.1 unknown protein | 814 | 3e-087 |
| AT5G08050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500), Uncharacterised conserved protein UCP022207 (InterPro:IPR016801); Has 41 Blast hits to 41 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 166 | 4e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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