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Information for unigene UN23424
| FASTA Sequence |
| Unigene ID: UN23424 | Length: 1052 |
| SNP | GGATATCAATAAAACTATATCAATTTTCAGGTACCACGCTGGAAATCTTCTGTTTCCAAATACTCTTTCCAAGGAACGAAAAGATA
TGTCGACGGACTCGTACGAAGATGCCCTTAAAAAACTTGGAGAGCTTCTCACCAAGAAATCGGATCTAGGTAACGTCGCAGCCGCA
AAGATCAAGCAGTTAACTAGTGAGCTAGAGGAACTTGATTCCAGCAAGATAGATTCTGTAGAAAGGATCAAGTCTGGATTCAACCA
TTTCAAGACTCATAATTATGAGAAGAATCCTTCGTTGTACAGTGCACTTGCCAAGAGCCAGAGCCCCAAGTTTCTGGTGTTTGCTT
GTGCGGATTCTCGAGTTTGCCCGTCTCACATCTTGAATTTTCAACTTGGGGAAGCATTTATCGTTAGAAACATTGCAAACATGGTG
CCACCTTATGATAAGACAAAACACTGTAATATTGGTGCCGCCCTTGAATATCCAATCACAGTCCTCAATGTGGAGAGCATTCTGGT
GATTGGTCACAGCTGTTGTGGTGGAATAAAAGGACTCATGGCAATTGAAGATGATGCGGCTCCCTTTAAGAGTGAATTCATAGAAG
ACTGGATCCAGATCTGTGCATCGGCCAAGAACAAGACCAGGCAGGATTGTAAAGACCTGAGCTTCGACGACCAGTGCACCAACTGT
GAGAAGGAAGCTGTGAACGTGTCGCTGGGGAACCTGTTATCGTACCCGTTCGTGAGAGAGCGAGTGGTGAAAAACAAGCTCGCCAT
AAGAGGCGCTCACTATGATTTTGTGAAAGGGACGTTTGATCTCTGGGAACTTGACTTCAAGACCACCCCAGCTTTTGCCTTGTCAT
AAAAGAGTTCTACTCATGTTTTCTCTCTATGTTGCTTCTAAGTGTGTTCTCAATTTCTCATCAATAATCATCTTTCTTTACCTTCA
GTTTCTTGTCTCTTTTTGTTTTTCTACTCAACTTCAGTTTCTTGTATAATCTCATCTTTTATGTTTTAAATTAAATGAATAAGCTA
TAACCAGCACTTTATTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_173785 beta carbonic anhydrase 3 [Arabidopsis thaliana] | 1218 | 2e-131 |
| XP_002890592 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1212 | 8e-131 |
| NP_177198 beta carbonic anhydrase 4 [Arabidopsis thaliana] | 1020 | 1e-108 |
| NP_849872 beta carbonic anhydrase 4 [Arabidopsis thaliana] | 1009 | 3e-107 |
| XP_002888778 hypothetical protein ARALYDRAFT_476161 [Arabidopsis lyrata subsp. lyrata] | 1005 | 8e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P27141 Carbonic anhydrase, chloroplastic | 819 | 1e-086 |
| P42737 Carbonic anhydrase 2, chloroplastic | 793 | 1e-083 |
| P46512 Carbonic anhydrase 1 | 768 | 1e-080 |
| P46511 Carbonic anhydrase | 765 | 2e-080 |
| P27140 Carbonic anhydrase, chloroplastic | 764 | 3e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZUC2 Carbonic anhydrase | 1218 | 1e-131 |
| Q94CE4 Carbonic anhydrase | 1020 | 1e-108 |
| O64595 Carbonic anhydrase | 1009 | 2e-107 |
| B9SHA8 Carbonic anhydrase | 934 | 9e-099 |
| A9PED7 Carbonic anhydrase | 904 | 3e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G23730.1 BCA3 (BETA CARBONIC ANHYDRASE 4); carbonate dehydratase/ zinc ion binding | 1219 | 5e-134 |
| AT1G70410.2 carbonic anhydrase, putative / carbonate dehydratase, putative | 1021 | 4e-111 |
| AT1G70410.3 carbonic anhydrase, putative / carbonate dehydratase, putative | 1010 | 8e-110 |
| AT1G70410.1 carbonic anhydrase, putative / carbonate dehydratase, putative | 1010 | 8e-110 |
| AT5G14740.1 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 796 | 5e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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