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Information for unigene UN23427
| FASTA Sequence |
| Unigene ID: UN23427 | Length: 2054 |
SSR | | CCGTTGTGTGAAACTGAAACATTGATATAGCCACAAGTAAAAGAAGAGAAGACGATACATTTCTTTTAGCCTATTGTTTTCACAAT
ACCAAATTAAGAAATCACACGCTACTATATTATCGACCTAAGGAGTGAAAACATACAAACCCCCAAAGAAAAAAAAGGAAAAAAAA
TTTAAGAACTTAACACGCATGAAAGGGGATAAGAAGTACACTATTTTCGTGACTTTTACTCCCTCACGTATACGTACGCAAAACAC
AAAAGAAGAACAAATAATTTTATATTAAAACTCCACAAAAGCATTAAACCATGCAGGCTAGATCACTCAAAGGCGGTGGTGTAAAG
CAGAGACCGGAGCGTGCGCAGCTGCTGCAGCTGGAACCGGTGATTTACATTGGTAACACTTAGCAAACAGACCAAAAGTGTCGACT
TGGCGAACAAAGTTGGTTACACTAGCCCATCCACCGAACCCGAACCCGACTATTAGAACCCATATCACCACGAAAGCGTTCAACAC
GTACATCGCCGTCCAGCTCGGCAAGAAGAACGGTGGCTTCTCCGCCGCATTCTGACGAGCGGAGGCAGATCGGTAAGTGAGCATGT
GAGCGAGGGAGGGGATAATATACACGGTGAAGCTAACCAGAAGAGCACCAACAGCTGAATTGATTGGACCGAAGAACGGGAAGATA
ATAGCTAAGAACCATATCGGTATAACCACAGGCAATCTAGCTAAAGCCCTCAAGCAAATGCTCTTTGTGTCATGCATCCCTATCAC
TTTCTCCCACACAAAGTAGAGTGGGGTACACGCGAATCCGAACGTTATAAACTGGTGAATGAGCATGAGAATAACGGCAGCGTCAC
GCCATCCGTTCTTGGGGAGAAGAGAGAACGCGTTGGAGTGGTCTAGAAGTGCGTCTCCGAAGGCCCAGTAAACGGCGGAAGCTGAC
GGAAGCGTTAGTGTGAAAACATACAACGTCGCCATCAAGTAAATGTACTTAAACTTTTGTGGTTTCCACATTGCATGCATAATCTC
GACAGTAACCGCGTGACCACCAAATGTATACAAGATATTGGTAGCTCCGGTGAAATAAAGCACTAGCTTCGTTGGACCTGTGTGCT
TCACACCTTCCGTCTGGCCGTGGATAATGGAGGCGATGGCTAAGTACCAGGCGGTGTAAGTGGTCATACCCAAGCCGAGGAATGAC
CAGATTCGGTAGTTGTGAAACGACGGTATAAACACAGTGGTTGCACAGCACGCGCCGAATATATAAGTCCATGTTCTCTTGTCCAA
GTGATCGTTTATGTAATAAATGTTACTGGCACAAGCAATGAGTTGGATTACAGATCCAAACAAGAGGAAAGTGCAATTAAATGCGA
GTCCTACTGCTTTCCAGTATGTGCCGAGTAGTCCATCAAGTACTTCGAACCACTGAATAACATGGTTTTTGAAGCTTTTGCCTTCT
TTCTCTTTACGAGCTCGATACTCAACGTAGAGAACACTGATGAGATACGCAGTCCAGCTTCCGAGTAGACCATAGAAGATCTGTAA
CACTATTCCTGACAACATCCCTAGTTGACTGAACGAGTACGGTAACGTCAAAAGCACTTGCGCCACCTGGTTAGATGCGCAGCTGA
ACCAAGCGTCCCAGACTGATCCACCGTGCCAGAGGAAGTTGCTTAGTGCAGAACCACCCGAGGGGTCGTGCTCGTCGGGTTTTCCG
GTGCTGGTGCCGTTGATCTGATCTACTTCGTTGTCATTTCCGCTTGAGACTATCGCCTCTTCTCCATGACTCACACCCGCCGACAT
TTTCGCCTTTAGATGTTTTCTCTTTTAGAGAAGAGAAGAAGAAGGTGAGAACGAATCAGAAGCAAACAAAGACCAAAACTGATAGG
GTCTCTCACTTGCTCTTTTCTTTTAAATAAAAAATTCTCTGTTCTCTCTATCTTTCTCTGACTTCAAGAAACAGAGCATGAACCCA
GAAGATGGCAGAGAGGAGAGAGAGAGAGAGAGTTATGGAAAGAAGGAGAAAGACTTCTTTGATCAGAGCAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACZ67478 auxin resistant 1 protein [Brassica rapa subsp. campestris] | 2575 | 2e-288 |
| BAJ33762 unnamed protein product [Thellungiella halophila] | 2498 | 1e-279 |
| XP_002879728 hypothetical protein ARALYDRAFT_482819 [Arabidopsis lyrata subsp. lyrata] | 2432 | 6e-272 |
| NP_565882 auxin transporter protein 1 [Arabidopsis thaliana] | 2425 | 4e-271 |
| Q9FEL7 RecName: Full=Auxin transporter-like protein 2; AltName: Full=AUX1-like protein 2; AltName: Full=MtLAX2 | 2239 | 2e-249 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96247 Auxin transporter protein 1 | 2442 | 2e-274 |
| Q9FEL7 Auxin transporter-like protein 2 | 2239 | 6e-251 |
| Q5N892 Auxin transporter-like protein 1 | 2216 | 3e-248 |
| Q8L884 Auxin transporter-like protein 4 | 2181 | 3e-244 |
| Q9LFB2 Auxin transporter-like protein 1 | 2169 | 8e-243 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D2K9I3 Auxin resistant 1 protein | 2575 | 1e-288 |
| A3RID2 Auxin influx transport protein | 2234 | 4e-249 |
| Q76DT1 AUX1-like auxin influx carrier protein | 2232 | 7e-249 |
| A5BII8 Putative uncharacterized protein | 2228 | 2e-248 |
| B9HCL2 Auxin influx carrier component | 2217 | 4e-247 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38120.1 AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter | 2443 | 1e-275 |
| AT5G01240.1 amino acid permease, putative | 2169 | 7e-244 |
| AT2G21050.1 amino acid permease, putative | 2002 | 2e-224 |
| AT1G77690.1 LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | 1959 | 2e-219 |
| AT5G01240.2 amino acid permease, putative | 1943 | 1e-217 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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