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Information for unigene UN23467
| FASTA Sequence |
| Unigene ID: UN23467 | Length: 968 |
SSR | SNP | GGACTTTTCACCTAGCTTTCGAAGGACTAACATCAATGGCGTCCTCTCCCATTTCCCCCGCTACTCAGCTTGGTTCGAGCAGAAGT
GCTACTATGTTGGCCATGTCGCGTGGGATGATGTTTGTGAAGCCAACGAGGACGAGTCACCAGATGGTGAGGAAGGAGAAGATTGG
TCTGAGAATCGCTTGTCAGGCGACGAGTATACCAGCAGACAACGTTCCAGACATGGAAAAGAGGAAAACTTTGAATCTTCTTCTTG
TCGGGGCTCCGGCATCATCACCATCTAAACCCGAGTCTCTCTCTCTCTCTCTCACGGTCTTGGAAATGGCGACAGTACCGGGACAA
TTGGTATGGGAGATCGTTAAGAGAAACAACTGTTTCTTGGTCAAACAGTTCGGTAGAGGCAATGCCAAAGTTCAGTTCAGCAAAGA
GAAGAACAATCTCTGCAACCTCAACTCCTACAAGCACTCTGGTCTTGCGAACAAGAAGACAGTGACCATCCAGCCAGCTGACAAGG
AACAAGGTGTTGTCCTCGCCACCACCAAGACCAAGAAGCAGAACAAGCCTAAGGTCTCTGTCAACAAGTCTATCCTTAAGAAGGAA
TTCCCCAGGATGTCCAAGGCTGTTGCTAACCAGGTGGTTGACAACTACTACAGGCCAGACTTGAAGAAATTCGCTCTTGCCAGACT
CAGTGTCATCAGCAAAAGCATTAGGGTTGCCAAGTCCGGTGCCAAGCAAAGAAACCGTCAAGCTTAAGCTTTTATCTTCAGAAACT
GTTTGTTTGTTTTTTTTTGAGTAAAAGCTTTAGCTGAAGGGTTTTTATTGAAGTTGTTTTTGTTGAAGTTGAACCACAACACTATG
CTATGCTCCTTTCCTTATCCTTTTCAACAAGGAGTTAGAACTTTCTCTTATTATGCATTTGTTTCGTGTTGGACCTTTTTTAAATC
AAATCAAGAAGTTGATCATTCG
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| GenBank top hits (Blast detail) | Score | e value |
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| ACF23027 ST45-109 [Eutrema halophilum] | 695 | 6e-071 |
| XP_002886025 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata] | 656 | 2e-066 |
| NP_179563 60S ribosomal protein L28-1 [Arabidopsis thaliana] | 652 | 6e-066 |
| XP_002867410 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata] | 652 | 6e-066 |
| NP_194670 60S ribosomal protein L28-2 [Arabidopsis thaliana] | 638 | 2e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82204 60S ribosomal protein L28-1 | 652 | 3e-067 |
| Q9M0E2 60S ribosomal protein L28-2 | 638 | 1e-065 |
| Q9ZR03 Cytochrome b6-f complex iron-sulfur subunit, chloroplastic | 293 | 1e-025 |
| Q962T2 60S ribosomal protein L28 | 197 | 1e-014 |
| Q3T0L7 60S ribosomal protein L28 | 176 | 4e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4YYB0 ST45-109 | 695 | 4e-071 |
| B9MST4 Putative ribosomal protein L28 | 583 | 4e-058 |
| A9P9G9 Predicted protein | 578 | 2e-057 |
| B9RKC5 60S ribosomal protein L28, putative | 570 | 1e-056 |
| A9P8K5 Predicted protein | 563 | 8e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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