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Information for unigene UN23486

FASTA Sequence
Unigene ID: UN23486Length: 813  SNP
GGAACGCAGAAGAAAGGAGAAAAGAGAAGAAAAAAAACATCTGTCTTCTTCTCTCCGTCACCTTTCCACCCGAAATTGTCTCTTGA
CAGCGTTTTGATCCAGCAACCATGGCTAACGCGGCTTCGGGGATGGCAGTCCATGATGACTGCAAGCTCAGGTTTCTTGAACTCAA
GGCGAAAAGGACGCACCGTTTCATTGTCTACAAGATCGAGGAGAAGCAGAAGCAAGTGGTTGTTGAGAAAGTTGGCGAGCCTATTC
TATCCTACGAGGATTTCGCTGCTAGCCTCCCTGCTGAAGAATGCCGTTACGCCATTTATGATTTCGACTTTGTCACTGTCGAGAAC
TGCCAGAAGAGCAAGATTTTCTTCATTGCTTGGTGTCCGGATGTAGCAAAGGTGAGAAGCAAGATGATCTACGCGAGCTCCAAGGA
CAGGTTCAAGCGTGAGCTTGATGGGATTCAAGTGGAGCTTCAGGCAACTGATCCAACTGAGATGGATCTCGATGTTTTCAAAAGCC
GCGTCAACTAAAAAGAATTAAGCTTCTTTGGCTCATATTCTATCTATCTACTATTCCTAAATTGTGTTTTCTTTTCTCTTATACAG
TTTCTTCTTGCAACTGTGATAAAAAAAACCTAACTCCCCGTCACTCTATCCATCTGGTCTCTCTTCTGTGTCTTTGTTACCATACA
GTGTTTCCTACATCTTATATTGAGAATTGTCCCAAGGGTTTGCATCCTTTTGTGTAAACTGTGGTGATTCCTTTAAGCGTTTGTTA
TCTTTGCTACAGTATCGATGAACAATGCAAACTTCATAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_851228 actin depolymerizing factor 4 [Arabidopsis thaliana]7001e-071
AAD09110 actin depolymerizing factor 4 [Arabidopsis thaliana]6946e-071
NP_190187 actin depolymerizing factor 1 [Arabidopsis thaliana]6812e-069
NP_001078247 actin depolymerizing factor 1 [Arabidopsis thaliana]6767e-069
XP_002864657 hypothetical protein ARALYDRAFT_332260 [Arabidopsis lyrata subsp. lyrata]6703e-068

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZSK3 Actin-depolymerizing factor 47005e-073
Q39250 Actin-depolymerizing factor 16818e-071
Q9FVI2 Actin-depolymerizing factor 16522e-067
Q9FVI1 Actin-depolymerizing factor 26163e-063
Q0DLA3 Actin-depolymerizing factor 76092e-062

TrEMBL top hits (Blast detail)Scoree value
B9DGG7 AT5G59890 protein7008e-072
B6SHB0 Putative uncharacterized protein6811e-069
A8MR09 Uncharacterized protein At3g46010.26765e-069
Q541R6 Actin-depolymerizing factor 16523e-066
B9T4D2 Actin depolymerizing factor, putative6452e-065

Arabidopsis top hits (Blast detail)Scoree value
AT5G59890.1 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding7014e-074
AT3G46010.1 ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding6826e-072
AT3G46010.2 ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding6772e-071
AT5G59890.2 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding6682e-070
AT3G46000.1 ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding6073e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
68  31%
 
717  65%
 
101  4%

Unigene MembersMember information