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Information for unigene UN23514

FASTA Sequence
Unigene ID: UN23514Length: 918  SNP
ATTTGCAAATCTTGAAAAAGAGTCTTATTTATTTAAATGACATGAGAAAACATTATACGCGCGACAAGAATTAATTATTACCCCGT
AAACAAAAGGAAAGACTTGTTGAACCAACCACAATACATATATATTAAAAGACATTAAATATGATAGATACCAAGTATATCTTGTA
AAGGGAAAAAACACGATTAAAGAGTCGAGACTTAAACCTAATAAGGTCTTTTAGGTTCGACAACGAAATCCACATGACTTCAATTC
TGCAGTACTATCAGTGGAATTAGTTAAGCCCATTTGGCGATGATCGACATGCCACCGCACCCAAGAAGAGCTGCAATGAAACACTT
GATCTGCATTTTGATGCTACCTTGAAGCTTTGGTCCCATGAACTCTGCCGCAAGAAGGTCCACAAGCGCCATGTAGATGAGCAATC
CTGCGGAGCATGCATTGAGCAATCCAACAGTTACCAATGCAGAGGGACTATTGTCTCTGTAGATGGTCGAAAGAGCGATCCCTAAG
GCTATTCCAAAAGGCGTTGTCACCGCAAAAAAGAACGCCATAAGAAACTTTTTCAAGTTCGTATACTCAGCCTGGAGAATGCAACC
ACCAAGACCCATGCCTTCGAACATTTGATGGAAGCAAAGAGCTGCGATGAGTCCTTTAATGGTGCAAGTGTCACTTGTTGCTCCTA
GAGATAGTCCAATGACTACAGAGTGAACTATGATTCCAAGTTCCAATACCATAGCAATGACTCGATATCTCAAGAGTTGTGCACTC
GGGGAATCTCCACTTTTAGTGGGTAAGGTAACATCATTTCCAGGGCCGTGACCATGACTATGTGGTAGATCCCAACTGCGTTCTTG
CTAGTATAAATGCTCGTAGCCATGGAATCGATGACTAAAGTGATAGACGGACAACATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACR14982 iron-regulated transporter 1 [Arabidopsis halleri subsp. gemmifera]8847e-093
CAE30485 Fe(II) transport protein IRT1 [Arabidopsis halleri subsp. halleri]8839e-093
XP_002869968 Fe(II) transport protein IRT1 [Arabidopsis lyrata subsp. lyrata]8793e-092
AAB01678 Fe(II) transport protein [Arabidopsis thaliana]8766e-092
NP_567590 Fe(2+) transport protein 1 [Arabidopsis thaliana]8766e-092

Swiss-Prot top hits (Blast detail)Scoree value
Q38856 Fe(2+) transport protein 18762e-093
Q8S3W4 Probable zinc transporter 87356e-077
O81850 Fe(2+) transport protein 27024e-073
Q8W245 Probable zinc transporter 106423e-066
Q8W246 Zinc transporter 75591e-056

TrEMBL top hits (Blast detail)Scoree value
D0Q1H1 Iron-regulated transporter 18845e-093
Q70IJ1 Fe(II) transport protein IRT18836e-093
Q0VJU0 Putative Fe(II) transporter 18683e-091
Q0VJU1 Putative Fe (II) transporter 18603e-090
B9ICK0 ZIP transporter (Fragment)7196e-074

Arabidopsis top hits (Blast detail)Scoree value
AT4G19690.2 IRT1 (iron-regulated transporter 1); cadmium ion transmembrane transporter/ copper uptake transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter8772e-094
AT4G19680.2 IRT2; iron ion transmembrane transporter/ zinc ion transmembrane transporter7033e-074
AT1G31260.1 ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter6432e-067
AT2G04032.1 ZIP7 (ZINC TRANSPORTER 7 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter/ zinc ion transmembrane transporter5601e-057
AT1G05300.1 ZIP5; cation transmembrane transporter/ metal ion transmembrane transporter5098e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  33%
 
103  20%
 
64  27%
 
91  7%
 
112  13%

Unigene MembersMember information