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Information for unigene UN23518
| FASTA Sequence |
| Unigene ID: UN23518 | Length: 638 |
SSR | SNP | GGAGAGTTGTGTGTTTTGATCGAAGAAAAGCTTTCGGTCTTTGTAATCAACAGGGTGTGGAAGAAGTAATGGCAAAAAGCACGTTC
AAGCAAGAGCATGACCTAGAGAAGAGAAGCGCAGAGGCTGCTCGGATTAGAGAGAAGTATCCAGATAGGATTCCGGTGATTGTTGA
GAAGGCTGAGAAGAGTGATATACCAACCATCGACAAGAAAAAAATACCTAGTCCCGGCGGATTTGACAGTAGGGCAATTTGTGTAT
GTGATTCGCAAAAGAATCAAACTGAGCGCAGAGAAGGCTATCTTTATATTTGTCGACAATGTTCTTCCTCCAACAGGTGCGTTGAT
GTCTGCAGTGTACGAAGATAAAAAGGAGGAGGATGGGTTCCTCTATGTCACTTACAGCGGGGAGAACACATTTGGATATGGATCTC
CATAGAAGCTCTCTCTCTTGCTGGATAATTTCATTCTACCTTCTTTCTGTACTTCGCATATCATCTTCTTATTAGTTATTTAAGCA
AGCAATCAGCCTATGTACTTCCCTAAGGACGTTCGATTGGGCGTTGATGTGTACAGAAAACATGAAATAATGTATATAAACTATGC
TCTAATAATAATAATAATATATTTTAGTTTCTTCTA
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002868127 hypothetical protein ARALYDRAFT_915092 [Arabidopsis lyrata subsp. lyrata] | 365 | 5e-033 |
| NP_567504 autophagy-related protein 8f [Arabidopsis thaliana] | 360 | 2e-032 |
| XP_002329916 predicted protein [Populus trichocarpa] | 353 | 1e-031 |
| XP_002525907 gaba(A) receptor-associated protein, putative [Ricinus communis] | 349 | 4e-031 |
| XP_002280077 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] | 346 | 8e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VYK7 Autophagy-related protein 8f | 360 | 9e-034 |
| Q8S926 Autophagy-related protein 8e | 345 | 5e-032 |
| Q9LZZ9 Autophagy-related protein 8g | 335 | 7e-031 |
| A2YS06 Autophagy-related protein 8C | 324 | 1e-029 |
| Q6Z1D5 Autophagy-related protein 8C | 324 | 1e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PID1 Predicted protein | 353 | 8e-032 |
| B9SIT8 Gaba(A) receptor-associated protein, putative | 349 | 2e-031 |
| B9GVG5 Predicted protein | 346 | 5e-031 |
| C6TCK7 Putative uncharacterized protein | 345 | 7e-031 |
| Q8L5F9 Microtubule associated protein | 345 | 7e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G16520.1 ATG8F (autophagy 8f); microtubule binding | 361 | 7e-035 |
| AT4G16520.2 ATG8F (autophagy 8f); microtubule binding | 361 | 7e-035 |
| AT2G45170.1 AtATG8e; microtubule binding | 345 | 5e-033 |
| AT2G45170.2 AtATG8e; microtubule binding | 345 | 5e-033 |
| AT3G60640.1 ATG8G (AUTOPHAGY 8G); microtubule binding | 335 | 7e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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